Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebia_20centrifuga_20[genbank_20GCA_5F001913855.1_202016-12-22] 3,019 sequences; 34,846,541 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq221 152 5e-32 seq454 127 2e-24 seq2162 113 4e-20 >seq221 Length=41398 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || |||||||||||||| ||||| || || || Sbjct 37044 CCGCCACGGAGACGAAGGACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAA 37103 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || | ||||||||||||||| ||||||||||| ||||||| ||| Sbjct 37104 AGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 37163 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | ||| | | ||||| |||||||| Sbjct 37164 ATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATGGTGTCAGAGGACTCCAC 37222 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || |||| ||||| ||||| |||||||| Sbjct 37223 CTCAAGTGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 37270 Score = 147 bits (162), Expect = 2e-30 Identities = 159/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||||| || ||||||||||| ||||||||||| ||||| ||||| | || |||||| Sbjct 37621 AGATGCAAAGTACTCTCCTTCTGGATGTTATAGTCAGAGAGTGTGCGACCATCCTCGAGC 37680 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| |||||||| || || || |||||||| | || | || ||||||||| ||| Sbjct 37681 TGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATC 37740 Query 41777 TTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTAC 41834 ||| ||| || | || | ||||| ||||| ||||| | || || || || | Sbjct 37741 TTTGCCTTGACATTGTCG--ATGGTGTCAGAGGACTCGACCTCAAGGGTGATAGTCTTGC 37798 Query 41835 CCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| |||||||| ||||||||||||||| Sbjct 37799 CCGTGAGCGTCTTGACGAAAATCTGCATG 37827 Score = 143 bits (158), Expect = 2e-29 Identities = 162/213 (76%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 41652 ACACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||| || || || |||||||||||||| ||||||||||| || ||||| || | || Sbjct 37337 ACACCGAGGTGAAGAGTGCTCTCCTTCTGGATGTTATAGTCAGAAAGGGTACGACCATCC 37396 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||||||||| |||||||| || || || |||||||| | |||| | |||||||| | Sbjct 37397 TCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGAGGAATTCCCTCCTTGT-C 37455 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || | || || | |||| | | | |||||| ||||||||||| | || || || Sbjct 37456 TTGGATCTTCGCCTTAACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGT 37515 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| |||| ||||| ||||| |||||||| Sbjct 37516 CTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 37548 Score = 114 bits (126), Expect = 1e-20 Identities = 100/122 (82%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 41641 GCGTAGACGTAA-CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGG 41698 ||| ||| ||| ||||| | || || |||||||||||||||||||| ||||| ||||| Sbjct 38169 GCGAAGATATAATCACCAAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGC 38228 Query 41699 GTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACG 41758 ||||| |||| ||||||||||| || ||||| || ||||||||||| || | ||||| | Sbjct 38229 GTGCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATAAGGCGCTGTTGATCGGGGGGAATG 38288 Query 41759 CT 41760 || Sbjct 38289 CT 38290 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || || ||||||||||| ||||| || ||||| || ||||| | || ||||| Sbjct 37906 AGGTGGAGAGTACTCTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGGCCATCCTCGAGT 37965 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| ||||| |||| ||||||||||| | |||| | |||||||| | ||| | Sbjct 37966 TGCTTGCCAGCGAAGATCAAACGCTGTTGGTCGGGAGGAATACCCTCCTTGT-CTTGAAT 38024 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | || | | | ||||| ||||| ||||| | || || || || || Sbjct 38025 CTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCC 38084 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| || || |||||||| Sbjct 38085 GGTCAAGGTCTTCACAAAGATCTGCAT 38111 >seq454 Length=96760 Score = 127 bits (140), Expect = 2e-24 Identities = 146/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||||||||| || |||||||| || ||||| | || || |||||||| || ||||| Sbjct 80282 CTCCTTCTGAATATTGTAGTCGGACAGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAA 80341 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||| || || | |||| || |||||| ||| ||| | || |||| || Sbjct 80342 GATAAGACGCTGCTGATCTGGTGGAATGCCCTCCTTATCC-TGAATCTTCGCTTTCACAT 80400 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||| ||| || ||||||| || ||||| || ||||| || ||||| | Sbjct 80401 TGTCGATCGTGTCGGACGATTCAACCTCCAATGTAATCGTCTTGCCCGTGAGGGTCTTGA 80460 Query 41850 CGAAAATCTGCATG 41863 |||| ||||||||| Sbjct 80461 CGAAGATCTGCATG 80474 >seq2162 Length=51060 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| |||||| || ||||| |||||| | Sbjct 4652 CCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTG 4711 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || |||||||| || ||||| |||| |||||| ||||| | |||| Sbjct 4712 AGAGTGCGCCCATCCTCAAGCTGCTTACCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGA 4771 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || ||| || | ||| ||||| ||||| | Sbjct 4772 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATG--GTGTCTGAGGACTCAA 4829 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAG 41841 |||| | || || ||||||||||| || Sbjct 4830 CCTCGAGAGTGATGGTTTTACCCGTGAG 4857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462286553802800