Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 250 3e-61 seq1 116 4e-21 seq5 98.7 1e-15 >seq3 Length=2355184 Score = 250 bits (276), Expect = 3e-61 Identities = 410/582 (70%), Gaps = 17/582 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || ||||||||||| | || ||| ||||||| Sbjct 1066469 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCGTTCTGGACGGCTGAAGAGATGGACCTC 1066410 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | |||||| | || | |||||||||||||| | ||||| | Sbjct 1066409 TCCAAGGATATCCATGACTGGACCAATCGTCTCAACGACAACGAGCGTTACTTCAT--AT 1066352 Query 116753 CACGTG--CTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC 116810 | |||| || || |||||||| || || || || || ||||| ||| |||| |||| Sbjct 1066351 CCCGTGTCCTTGCATTTTTCGCTGCTTCAGATGGTATTGTTAACGAAAATTTGGTGGAGC 1066292 Query 116811 GTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 | ||| | | || ||||||| || || || || ||||| |||||||| || ||| | Sbjct 1066291 GCTTCTCGAACGAAGTGCAGGCTGCTGAAGCCCGTTGCTTTTACGGCTTCCAAATCATGA 1066232 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA---CGTGCGCTCTT 116927 ||||||| | || || |||| || || ||| |||||||| || | | | | Sbjct 1066231 TGGAGAATATCCATTCTGAAACCTACTCTCTCCTTATCGACACCTATATCAAGGACCCAG 1066172 Query 116928 CGGAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 | ||| | || || | || || | || || ||||| || || |||||||| ||| Sbjct 1066171 CCGAGCGTGA--CTTCCTT--TTCGATGCTATGGAGACCATTCCCTGCGTCAAGCGCAAG 1066116 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCG-GCAGAGAGGCCGCCTTCGGCGAGCGCCTGGT 117045 || || ||||| || ||||| ||| ||| | || | |||| ||||||||| || Sbjct 1066115 GCAGATTGGGCTCTCAAGTGGATATCCGACCAGCG-TTCCACATTCGCCGAGCGCCTTGT 1066057 Query 117046 GGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCT 117105 || ||||| || || |||||| |||||||||| || |||||| | || || ||| | Sbjct 1066056 CGCATTCGCTGCTGTGGAGGGCATCTTCTTTTCAGGGTCCTTCGCCTCTATCTTCTGGTT 1065997 Query 117106 CAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 ||||| ||||| || |||||||| || || ||| || |||||||| | | ||||| Sbjct 1065996 GAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCGAATGAGCTCATTAGCCGCGACGA 1065937 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTT 117207 ||| ||||| ||||||||| ||| || |||||| ||||| Sbjct 1065936 GGGCATGCATACCGACTTTGCTTGTCTGTTGTTCAGTCATTT 1065895 >seq1 Length=3473262 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || ||||| ||||| || ||||| || | || ||||| || | Sbjct 2088817 AATGCAGATTTTCGTGAAGACGCTGACGGGGAAGACCATTACGTTGGAAGTCGAGTCCTC 2088876 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || |||| | |||| ||| || | ||||| ||||| ||||| | |||| Sbjct 2088877 GGACACGATTGACAACG-TAAAGGCAAAGATCCAGGACAAGGAGGGTATCCCACCTGACC 2088935 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| | |||| || ||||| ||||| || || | |||||| || ||||||| Sbjct 2088936 AGCAACGTTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGCACTCTTTCTGACTACA 2088995 Query 40868 ACATCCAGAAGGA 40880 |||| |||||||| Sbjct 2088996 ACATTCAGAAGGA 2089008 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || ||||| |||||||| | || || ||| || | Sbjct 2088541 ATGCAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACGTTGGAGGTTGAATCCTCT 2088600 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||| | || |||| ||||| |||||||| || | ||||| Sbjct 2088601 GACACCATTGATAACG-TCAAAGCGAAGATTCAGGACAAGGAGGGCATACCGCCTGACCA 2088659 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || || || || || | || || | ||||||||| Sbjct 2088660 GCAGCGTCTCATCTTCGCCGGGAAGCAACTTGAGGATGGTCGTACTTTATCCGACTACAA 2088719 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| ||||||||| | || || ||||| Sbjct 2088720 CATTCAGAAGGAGTCTACTCTTCATCT 2088746 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || || ||||||||| | || || || | | Sbjct 2088313 ATGCAAATCTTCGTCAAAACCTTGACAGGGAAGACCATCACCCTTGAGGTTGAGTCGTCG 2088372 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || |||| ||||| ||||| || || | ||||| Sbjct 2088373 GATACCATCGACAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 2088431 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || || |||||| |||| || | ||||| || |||||||| Sbjct 2088432 GCAACGTCTTATCTTTGCTGGGAAACAGTTGGAGGATGGCCGCACTCTGTCTGACTACAA 2088491 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| ||| | || || || || || |||| Sbjct 2088492 CATCCAGAAAGAGTCTACCCTTCACCTCGTTCTGCG 2088527 >seq5 Length=1722318 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | ||||||||||| | |||| ||| || || ||||| || |||| |||| Sbjct 381360 GCATCCCCCCTGACCAGCAACGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGTCGCA 381419 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGG 40912 |||||||||| ||||||||||| || ||| | || || || || ||| | ||| || | | Sbjct 381420 CCCTCAACGATTACAACATCCAAAAAGAGTCTACCCTTCACCTGGTGCTTCGCCTGCGTG 381479 Query 40913 GCGG 40916 | || Sbjct 381480 GTGG 381483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218504454080