Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-18 >seq1 Length=3473262 Score = 105 bits (116), Expect = 5e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||||| |||||||||||||||||||| || ||| | || || || || Sbjct 2089021 GTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCATCCTCAAGCTG 2088962 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || ||||| || || ||||| || || | ||||||||||||| || || Sbjct 2088961 CTTGCCAGCAAAGATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTT 2088902 Query 45253 TTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCG 45311 | ||| | || | || | ||||| ||| || |||| ||||| ||||| |||| Sbjct 2088901 TGCCTTTA-CGTTGTCAATCGTGTCCGAGGACTCGACTTCCAACGTAATGGTCTTCCCCG 2088843 Query 45312 TCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||||| || || ||||| Sbjct 2088842 TCAGCGTCTTCACGAAAATCTGCAT 2088818 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/214 (71%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGT 45182 |||||||| || || || |||||||||||||||||||||| | ||| ||| | | Sbjct 2088752 ATACCAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTA--CGACCAT 2088695 Query 45183 CGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGT 45242 | || ||||| || |||||||| || | ||||| ||||| || || | |||||||||| Sbjct 2088694 CCTCAAGTTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGT 2088635 Query 45243 CCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302 || ||| || || || | | | |||| || ||||||| || || | Sbjct 2088634 CCTGAATCTTCGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGG 2088575 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| |||| ||||| || ||||||||||| Sbjct 2088574 TCTTGCCGGTCAATGTCTTGACGAAGATTTGCAT 2088541 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||| ||||| ||||||||||| ||| ||| | || |||| ||||| || || || Sbjct 2088504 CTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAACTGTTTCCCAGCAAA 2088445 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || || ||||| ||||| | ||||||||||||| ||| || ||| || Sbjct 2088444 GATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTT 2088385 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| ||| ||||| | ||| || ||||| || |||| || || || Sbjct 2088384 GTCGATGGTATCCGACGACTCAACCTCAAGGGTGATGGTCTTCCCTGTCAAGGTTTTGAC 2088325 Query 45325 AAAGATTTGCATG 45337 |||||||||||| Sbjct 2088324 GAAGATTTGCATG 2088312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074679982268