Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 187 2e-42 seq1 116 3e-21 >seq3 Length=2355184 Score = 187 bits (206), Expect = 2e-42 Identities = 390/572 (68%), Gaps = 27/572 (5%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| ||||| ||||| ||||| | ||||| | ||||| Sbjct 1066469 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCGTTCTGGACGGCTGAAGAGATGGACCTC 1066410 Query 57630 TCTAAGGATCTGAGCGATTGGG---ATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||| | || ||| || ||||| || ||| | | || || | Sbjct 1066409 TCCAAGGATATCCATGACTGGACCAATCGTCTCAACGACAACGAGCGTTACTTCAT--AT 1066352 Query 57687 CACGTGT--TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 | ||||| | || |||||||| || || ||||||||||||||||| |||||||| || Sbjct 1066351 CCCGTGTCCTTGCATTTTTCGCTGCTTCAGATGGTATTGTTAACGAAAATTTGGTGGAGC 1066292 Query 57745 GATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 | || || | |||||||| | | || || | ||||||||||| || ||| | | Sbjct 1066291 GCTTCTCGAACGAAGTGCAGGCTGCTGAAGCCCGTTGCTTTTACGGCTTCCAAATCATGA 1066232 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || || | ||||| |||| || || || || ||||| || || | |||||| | Sbjct 1066231 TGGAGAATATCCATTCTGAAACCTACTCTCTCCTTATCGACACCTATATCAAGGACCCAG 1066172 Query 57865 ACGAGAAACGTAGACTG----TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG--- 57917 |||| ||| |||| ||| | || || || || || ||| || |||| Sbjct 1066171 CCGAG---CGT-GACTTCCTTTTCGATGCTATGGAGACCATTCCCTG---CGTCAAGCGC 1066119 Query 57918 AAGGCAGAGTGGTCAATCAAATGGATAAAAAGCG-CCACGG--CCACGTTCGCCGAGAGG 57974 |||||||| ||| | |||| |||||| || ||| | |||| ||||||||| | Sbjct 1066118 AAGGCAGATTGGGCTCTCAAGTGGATATC---CGACCAGCGTTCCACATTCGCCGAGCGC 1066062 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || |||| ||||| || || || || || |||||||| || ||| || | || || Sbjct 1066061 CTTGTCGCATTCGCTGCTGTGGAGGGCATCTTCTTTTCAGGGTCCTTCGCCTCTATCTTC 1066002 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| ||||||| ||||| || |||||||| || || || || ||| | || ||| Sbjct 1066001 TGGTTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCGAATGAGCTCATTAGCCGC 1065942 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 |||||||| | ||||| || ||||| || || Sbjct 1065941 GACGAGGGCATGCATACCGACTTTGCTTGTCT 1065910 >seq1 Length=3473262 Score = 116 bits (128), Expect = 3e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| |||| ||||| || ||||| | || |||||| | || Sbjct 2088541 ATGCAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACGTTGGAGGTTGAATCCTCT 2088600 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| || || ||||||||| ||| | ||||| |||||| Sbjct 2088601 GACACCATTGATAACGTCAAAGCGAAGATTCAGGACAAGGAGGGCATACCGCCTGACCAG 2088660 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || || | || || | ||| | ||| || ||| Sbjct 2088661 CAGCGTCTCATCTTCGCCGGGAAGCAACTTGAGGATGGTCGTACTTTATCCGACTACAAC 2088720 Query 31373 ATTCAAAAAGAATCGACTCTTCATC-TGGTA 31402 ||||| || || || |||||||||| ||||| Sbjct 2088721 ATTCAGAAGGAGTCTACTCTTCATCTTGGTA 2088751 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| || || ||||||| || || |||||| | || ||||| |||| Sbjct 2088312 CATGCAAATCTTCGTCAAAACCTTGACAGGGAAGACCATCACCCTTGAGGTTGAGTCGTC 2088371 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | || || || || ||||||||| || | || || ||||| Sbjct 2088372 GGATACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 2088431 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || || ||||| ||||||||||| || ||| || || || || Sbjct 2088432 GCAACGTCTTATCTTTGCTGGGAAACAGTTGGAGGATGGCCGCACTCTGTCTGACTACAA 2088491 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || ||||| || || || Sbjct 2088492 CATCCAGAAAGAGTCTACCCTTCACCTCGTTCT 2088524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765798215360