Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23]
108 sequences; 30,352,192 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 5e-33
>seq3
Length=2355184
Score = 156 bits (172), Expect = 5e-33
Identities = 383/577 (66%), Gaps = 8/577 (1%)
Strand=Plus/Plus
Query 33563 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAA 33622
|||||| | |||| || ||| || || ||| |||| |||||||| | ||||| |
Sbjct 1065894 TAAATGACTGAACAACAGACAAGCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAG 1065953
Query 33623 TTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGC 33682
|| || || || || || |||||||| || || ||||| || | ||| || || || ||
Sbjct 1065954 CTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGC 1066013
Query 33683 GAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA 33742
||| || || ||||||||||| || || || ||||| || || | ||| | ||| | |
Sbjct 1066014 GAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAA 1066073
Query 33743 ACCGG--CGCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799
|| |||| ||| ||||||||| |||||||||| ||||| || || || ||
Sbjct 1066074 TGTGGAACGCTGGTCGGATATCCACTTGAGAGCCCAATCTGCCTTGCGCTTGACGCAGGG 1066133
Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33859
|| || || || |||| || || ||| || || || | ||| || ||
Sbjct 1066134 AATGGTCTCCATAGCATCGAAAAGGAAGTCACGCTCGGCTGGGTCCTTGATATAGGTGTC 1066193
Query 33860 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919
||| | ||| || |||| ||||| || || || || || || || ||||| ||
Sbjct 1066194 GATAAGGAGAGAGTAGGTTTCAGAATGGATATTCTCCATCATGATTTGGAAGCCGTAAAA 1066253
Query 33920 ACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33979
|| | || || | | ||||||||| | | || || || | |||||||| || ||
Sbjct 1066254 GCAACGGGCTTCAGCAGCCTGCACTTCGTTCGAGAAGCGCTCCACCAAATTTTCGTTAAC 1066313
Query 33980 TATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 34039
|| ||||| || || ||||| || | ||| | ||| || || |||| ||
Sbjct 1066314 AATACCATCTGAAGCAGCGAAAAATGCAAGGACACGGGATATGAAGTAACGCTCGT-TGT 1066372
Query 34040 TGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCC 34095
||| | || |||| |||| |||||| || || | |||| ||||| | ||||
Sbjct 1066373 CGTTGAGACGATTGGTCCAGTCATGGATATCCTTGGAGAGGTCCATCTCTTCAGCCGTCC 1066432
Query 34096 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132
| || || || || ||||| || ||||| | ||||||
Sbjct 1066433 AGAACGAGGCTTCAGCCTTCTTGTACATTTGCCAGAT 1066469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816749746240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |