Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3 156 5e-33 >seq3 Length=2355184 Score = 156 bits (172), Expect = 5e-33 Identities = 383/577 (66%), Gaps = 8/577 (1%) Strand=Plus/Plus Query 33563 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAA 33622 |||||| | |||| || ||| || || ||| |||| |||||||| | ||||| | Sbjct 1065894 TAAATGACTGAACAACAGACAAGCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAG 1065953 Query 33623 TTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGC 33682 || || || || || || |||||||| || || ||||| || | ||| || || || || Sbjct 1065954 CTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGC 1066013 Query 33683 GAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA 33742 ||| || || ||||||||||| || || || ||||| || || | ||| | ||| | | Sbjct 1066014 GAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAA 1066073 Query 33743 ACCGG--CGCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 || |||| ||| ||||||||| |||||||||| ||||| || || || || Sbjct 1066074 TGTGGAACGCTGGTCGGATATCCACTTGAGAGCCCAATCTGCCTTGCGCTTGACGCAGGG 1066133 Query 33800 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 33859 || || || || |||| || || ||| || || || | ||| || || Sbjct 1066134 AATGGTCTCCATAGCATCGAAAAGGAAGTCACGCTCGGCTGGGTCCTTGATATAGGTGTC 1066193 Query 33860 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 33919 ||| | ||| || |||| ||||| || || || || || || || ||||| || Sbjct 1066194 GATAAGGAGAGAGTAGGTTTCAGAATGGATATTCTCCATCATGATTTGGAAGCCGTAAAA 1066253 Query 33920 ACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33979 || | || || | | ||||||||| | | || || || | |||||||| || || Sbjct 1066254 GCAACGGGCTTCAGCAGCCTGCACTTCGTTCGAGAAGCGCTCCACCAAATTTTCGTTAAC 1066313 Query 33980 TATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 34039 || ||||| || || ||||| || | ||| | ||| || || |||| || Sbjct 1066314 AATACCATCTGAAGCAGCGAAAAATGCAAGGACACGGGATATGAAGTAACGCTCGT-TGT 1066372 Query 34040 TGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCC 34095 ||| | || |||| |||| |||||| || || | |||| ||||| | |||| Sbjct 1066373 CGTTGAGACGATTGGTCCAGTCATGGATATCCTTGGAGAGGTCCATCTCTTCAGCCGTCC 1066432 Query 34096 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132 | || || || || ||||| || ||||| | |||||| Sbjct 1066433 AGAACGAGGCTTCAGCCTTCTTGTACATTTGCCAGAT 1066469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816749746240