Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 seq5 84.2 2e-11 >seq1 Length=3473262 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| ||||||||||| || ||||| || || | Sbjct 2088539 CCACCACGGAGACGCAGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAC 2088480 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || | |||||| |||||| |||| ||||||||||| || ||||| Sbjct 2088479 AGAGTGCGGCCATCCTCCAACTGTTTCCCAGCAAAGATAAGACGTTGCTGGTCAGGAGGA 2088420 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | || | | || | || || | | ||| || Sbjct 2088419 ATACCCTCCTTGTC-CTGAATCTTCGCCTTCACGTTGTCGATGGTATCCGACGACTCAAC 2088361 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | ||||| || ||||| ||||| ||||| |||||||| Sbjct 2088360 CTCAAGGGTGATGGTCTTCCCTGTCAAGGTTTTGACGAAGATTTGCAT 2088313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||| || |||||||| || ||| | || | || || || || Sbjct 2088743 TGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTCAAGTTGC 2088684 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || || |||| ||||| ||||| || || |||||||| || ||||| ||| | || Sbjct 2088683 TTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCC-TGAATCTT 2088625 Query 139682 TGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | ||| | | || || |||| | || || ||||| | || | ||||||||||| Sbjct 2088624 CGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGCCGGT 2088565 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 ||| || || ||||| ||||||||| Sbjct 2088564 CAATGTCTTGACGAAGATTTGCATA 2088540 >seq5 Length=1722318 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| |||||||||||||| ||||| |||||| | | |||| |||||| ||||| Sbjct 381460 GTGAAGGGTAGACTCTTTTTGGATGTTGTAATCGTTGAGGGTGCGACCGTCTTCAAGCTG 381401 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGC 139661 || ||||| |||||| ||||||||| || || || |||| Sbjct 381400 CTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGC 381360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063330313600