Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 >seq3 Length=2355184 Score = 147 bits (162), Expect = 3e-30 Identities = 380/576 (66%), Gaps = 6/576 (1%) Strand=Plus/Plus Query 42046 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAA 42105 |||||| | |||| || ||| || || ||| |||| ||||| || | ||||| | Sbjct 1065894 TAAATGACTGAACAACAGACAAGCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAG 1065953 Query 42106 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGC 42165 || || || || || || |||||||| || || ||||| || | ||| || ||||| || Sbjct 1065954 CTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGC 1066013 Query 42166 AAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA 42225 || || || ||||||||||| || || || || || || || | ||| | ||| | | Sbjct 1066014 GAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAA 1066073 Query 42226 ACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 || || ||| ||||||||| |||||||||| ||||| || || || || Sbjct 1066074 TGTGGAACGCTGGTCGGATATCCACTTGAGAGCCCAATCTGCCTTGCGCTTGACGCAGGG 1066133 Query 42283 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 42342 || || || || |||| || || ||| || || || | ||| || || Sbjct 1066134 AATGGTCTCCATAGCATCGAAAAGGAAGTCACGCTCGGCTGGGTCCTTGATATAGGTGTC 1066193 Query 42343 GATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 42402 ||| | ||| || |||| ||||| || || || || || || || ||||| || Sbjct 1066194 GATAAGGAGAGAGTAGGTTTCAGAATGGATATTCTCCATCATGATTTGGAAGCCGTAAAA 1066253 Query 42403 ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCAC 42462 || | ||| || | | |||| ||||| | | || || || | ||||||||||| || Sbjct 1066254 GCAACGGGCTTCAGCAGCCTGCACTTCGTTCGAGAAGCGCTCCACCAAATTTTCGTTAAC 1066313 Query 42463 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CC 42520 || || || || || ||||| || | ||| | ||| || || |||| | Sbjct 1066314 AATACCATCTGAAGCAGCGAAAAATGCAAGGACACGGGATATGAAGTAACGCTCGTTGTC 1066373 Query 42521 GGTGTTA-ATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCA 42579 | || | || |||| |||| |||||| || || | || | ||||| ||||||| Sbjct 1066374 GTTGAGACGATTGGTCCAGTCATGGATATCCTTGGAGAGGTCCATCTCTTCAGCCGTCCA 1066433 Query 42580 AAATGATGCTTCTGCCTTTTTATACATATTCCAGAT 42615 || || ||||| ||||| || ||||| | |||||| Sbjct 1066434 GAACGAGGCTTCAGCCTTCTTGTACATTTGCCAGAT 1066469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138293962080