Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 127 5e-24 seq1 120 7e-22 >seq3 Length=2355184 Score = 127 bits (140), Expect = 5e-24 Identities = 303/452 (67%), Gaps = 11/452 (2%) Strand=Plus/Minus Query 268856 CTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGT 268915 ||||| ||||| || | | |||||||| |||||||||||| | || ||| |||| Sbjct 1066343 CTTGCATTTTTCGCTGCTTCAGATGGTATTGTTAACGAAAATTTGGTGGAGCGCTTCTCG 1066284 Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 | || || ||| | |||||||| | || |||||||| ||||| || || || ||| Sbjct 1066283 AACGAAGTGCAGGCTGCTGAAGCCCGTTGCTTTTACGGCTTCCAAATCATGATGGAGAAT 1066224 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAG 269035 || ||||| || | ||| ||| | || || || ||||| | || || | | | Sbjct 1066223 ATCCATTCTGAAACCTACTCTCTCCTTATCGACACCTATATCAAGGACC-CAGCCGAGCG 1066165 Query 269036 AAAAGACTA--TTTTC--TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATG 269091 |||| ||||| | ||||| || || ||| || | || | || || Sbjct 1066164 T---GACTTCCTTTTCGATGCTATGGAGACCATTCCCTGCGTCAAGCGCAAGGCAGATTG 1066108 Query 269092 GGCTCTGAAATGGATAAACGAT-AGCGCGCCTTA--CGGAGAAAGGTTAGTTGCTTTTGC 269148 |||||| || |||||| ||| |||| || | || || | | || || || || Sbjct 1066107 GGCTCTCAAGTGGATATCCGACCAGCGTTCCACATTCGCCGAGCGCCTTGTCGCATTCGC 1066048 Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208 ||||| || || || |||||||| ||||| || ||| ||||||| ||||||||||| | Sbjct 1066047 TGCTGTGGAGGGCATCTTCTTTTCAGGGTCCTTCGCCTCTATCTTCTGGTTGAAGAAGCG 1065988 Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268 || |||||||| || | || ||||| || || | || ||| | ||||| || | || Sbjct 1065987 CGGTCTTATGCCCGGTCTTACCTTCTCGAATGAGCTCATTAGCCGCGACGAGGGCATGCA 1065928 Query 269269 CTGCGACTTCGCTTGTTTATTATTTACTAATT 269300 |||||| |||||| | || || | | ||| Sbjct 1065927 TACCGACTTTGCTTGTCTGTTGTTCAGTCATT 1065896 >seq1 Length=3473262 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | ||||| || |||||||| || ||||| |||| ||| | ||| || || ||| Sbjct 2088746 AGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTCAAGT 2088687 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || || || || || || | ||| || ||||| ||||| || || || ||||||||| Sbjct 2088686 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTGAATC 2088627 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || ||||| || || || | ||| || | ||| ||||| | || || ||||| || Sbjct 2088626 TTCGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGCCG 2088567 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || | ||| || || || || ||||| Sbjct 2088566 GTCAATGTCTTGACGAAGATTTGCAT 2088541 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| |||||||| || || |||||||| ||||| | || || || | ||||| ||| Sbjct 2088509 GTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAACTGTTTCCCA 2088450 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | || || |||||||| || || || || ||||||||||| || || Sbjct 2088449 GCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTC 2088390 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | || ||||| || || || ||||| || || | ||| Sbjct 2088389 ACGTTGTCGATGGTATCCGACGACTCAACCTCAAGGGTGATGGTCTTCCCTGTCAAGGTT 2088330 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 2088329 TTGACGAAGATTTGCAT 2088313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396806752464