Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 116 1e-20 seq8 102 2e-16 >seq3 Length=2355184 Score = 116 bits (128), Expect = 1e-20 Identities = 152/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTT---CATTCGCGGAACGTCTT 22497 |||||||||||||| || || ||||| | | | |||| ||||||| || || ||| Sbjct 1066118 AAGGCAGATTGGGCTCTCAAGTGGATATCCGACCAGCGTTCCACATTCGCCGAGCGCCTT 1066059 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 | ||||| |||| || || ||||| |||||||| || | || | ||||| ||| Sbjct 1066058 GTCGCATTCGCTGCTGTGGAGGGCATCTTCTTTTCAGGGTCCTTCGCCTCTATCTTCTGG 1065999 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 | || || || | ||||||| ||||| || || || |||||| | |||||||| || Sbjct 1065998 TTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCGAATGAGCTCATTAGCCGCGAC 1065939 Query 22618 GAGGGTCTTCATACCGATTTTGCGTGTATG 22647 ||||| | |||||||| ||||| ||| || Sbjct 1065938 GAGGGCATGCATACCGACTTTGCTTGTCTG 1065909 >seq8 Length=1450735 Score = 102 bits (112), Expect = 2e-16 Identities = 212/316 (67%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 || |||||| | ||||| |||||| ||| || || ||| || ||||| ||| Sbjct 940170 TAGTTTCGGCTTCAAGACACTGGAGAGATCGTATCTGCTTCGCATAGATGGTCGCGTTGC 940111 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 || || || || || ||| | ||| | |||||| | ||||| || | || |||| Sbjct 940110 CGAGCGTCCACAACACATGATCATGAGAGTTGCTGTCGGTATTCACGGGGAAGACATTGA 940051 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566 | | | |||||||||| || | | || |||| || ||| |||| || Sbjct 940050 CCGTGTGCTGCAAACATATAACCTCATGTCAGAACGATACTTCAACCATGCCTCGCCTAC 939991 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | | ||||||||| |||| | ||||||| | |||||| || || || ||||| Sbjct 939990 ACTCTTCAATGCTGGCACTCCTCATCCACAACTCAGTTCTTGTTTCCTCCTTTGTATGAA 939931 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||| || |||||||||||||||| |||||| || || || || || | || |||| Sbjct 939930 GGATGACTCCATCGAGGGTATCTATGACACGCTCAAAAACTGCGCGATGATCAGTAAGAC 939871 Query 363687 TGCAGGCGGAATTGGT 363702 ||| || || |||||| Sbjct 939870 TGCTGGTGGCATTGGT 939855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351796484456