Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq11 100 2e-16 seq1 89.7 3e-13 >seq11 Length=871948 Score = 100 bits (110), Expect = 2e-16 Identities = 213/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 6182 TCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGA 6241 |||| | || | ||| ||||||||||||| ||||| | ||| |||| |||| Sbjct 370011 TCGTGACGTCGATGACAAGTTCTACCGCTACCGTATGCCTCTTCTCTTGACCAAAATCGA 370070 Query 6242 GGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCT 6301 ||| ||||| || ||||| || || ||| | |||||| |||| ||||| || || Sbjct 370071 GGGCAAGGGCAATGGTATCAAGACTGTCGTCCCGAACATGTCTGACGTCGCCCGTGCACT 370130 Query 6302 CGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCA 6361 |||||| || | ||| || || | ||||| ||||| ||||| || ||||| | Sbjct 370131 ATCCCGCCCTCCCTCTTACATCACCAAGTTCTTCGGTTGCGAGCTTGGTGCACAGACACC 370190 Query 6362 GTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCC---AAGCT 6418 ||| ||| | || ||||| |||| ||| || || || ||| | || |||| | ||| Sbjct 370191 GTTCGATGAAAAGAACGATCGCTACATTGTCAATGG--CGC-TCACGATGCCTCTAGGCT 370247 Query 6419 GCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCC 6478 | || | |||||||| || || ||| || || || || || || | ||||| Sbjct 370248 CCGAGAGCTCCTTGACGGTTTCATCGACAAATTCGTACTCTGCCGTTCGTGTAAGAACCC 370307 Query 6479 GGAGACCGAGCTTAT 6493 |||||||| || || Sbjct 370308 TGAGACCGACCTCAT 370322 >seq1 Length=3473262 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||||| || ||| || || || ||||| |||| Sbjct 2088541 TACCACCACGGAGACGCAGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAG 2088482 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | || | || || || ||||| || ||||| || || ||||| || || | | Sbjct 2088481 ACAGAGTGCGGCCATCCTCCAACTGTTTCCCAGCAAAGATAAGACGTTGCTGGTCAGGAG 2088422 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT-TCA 38267 | | || || |||||| ||| || |||||| || | || ||||| | || ||| Sbjct 2088421 GAATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTATC-CGACGACTCA 2088363 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || | || || || || || ||||||||||| ||||| || |||||| Sbjct 2088362 ACCTCAAGGGTGATGGTCTTCCCTGTCAAGGTTTTGACGAAGATTTGCATG 2088312 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 ||||||||||| ||||| ||||| ||||| ||||| | | || | || || | || Sbjct 2089020 TGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCATCCTCAAGCTGC 2088961 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || ||||| || | ||||| || || | |||| || || |||||| || ||| Sbjct 2088960 TTGCCAGCAAAGATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTT 2088901 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| || || | | || || || ||||| || ||||| || || |||||| Sbjct 2088900 GCCTTTACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAACGTAATGGTCTTCCCCGTC 2088841 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | || |||||||| |||||||| Sbjct 2088840 AGCGTCTTCACGAAAATCTGCAT 2088818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946759125748