Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 168 7e-37 >seq3 Length=2355184 Score = 168 bits (186), Expect = 7e-37 Identities = 378/563 (67%), Gaps = 15/563 (3%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || |||||||||||||| | || ||||| || || | |||||| ||| || | | Sbjct 1065913 CAAGCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGA 1065972 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||| | ||| || || || || || || ||||| || Sbjct 1065973 CCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCGAAGGACCCTGAAAAGAAG 1066032 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || || ||||| || || ||||| |||| || ||||| || || |||| ||| | Sbjct 1066033 ATGCCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAA---TGTGGAACG-CTGGTC 1066088 Query 93272 ----ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 ||||| || | ||||||||| || || ||| | || || | || || ||||| Sbjct 1066089 GGATATCCACTTGAGAGCCCAATCTGCCTTGCGCTTGACGCAGGGAATGGTCTCCATAGC 1066148 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 | || ||| | || |||||| | | || || || || ||||| | ||||| || Sbjct 1066149 ATCGAAAAGGAAGTCACGCTCGGCTGGGTCCTTGATATAGGTGTCGATAAGGAGAGAGTA 1066208 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 |||||||||||| ||||||||| |||||||| ||||| || || | ||||| | Sbjct 1066209 GGTTTCAGAATGGATATTCTCCATCATGATTTGGAAGCCGTAAAAGCAACGGGCTTCAGC 1066268 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||||||||| | || || | ||| || | |||||| || || |||||||| || || Sbjct 1066269 AGCCTGCACTTCGTTCGAGAAGCGCTCCACCAAATTTTCGTTAACAATACCATCTGAAGC 1066328 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATC 93564 || ||||| || | | | | ||| || | ||| | || || | | || Sbjct 1066329 AGCGAAAAATGCAAGGACACGGGATATGAAGTAACGCTCGTTGTCGTTGAGACGATTGGT 1066388 Query 93565 CCAATC--GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCT 93622 ||| || |||| ||| || || || || | ||||| | ||||| ||||| ||||| Sbjct 1066389 CCAGTCATGGAT--ATCCTTGGAGAGGTCCATCTCTTCAGCCGTCCAGAACGAGGCTTCA 1066446 Query 93623 GCTTTTTTGTACATATCCCATAT 93645 || || |||||||| | ||| || Sbjct 1066447 GCCTTCTTGTACATTTGCCAGAT 1066469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860048237920