Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 104 5e-17 seq2 91.5 3e-13 >seq1 Length=3473262 Score = 104 bits (114), Expect = 5e-17 Identities = 230/339 (68%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 218673 TGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGA-GCAGAGTCTGCAGGGTGCC- 218730 ||||||| |||||||| | | | ||| || |||||||| ||| | || || || | Sbjct 2709829 TGGTTATATATCCGAAGTAGCCGCCTATCACCACGGTGAAGCATCG-CT-CACCATGACT 2709772 Query 218731 ATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAAC 218790 || || | | || || || ||||| || |||||| | ||| | || ||||| ||| Sbjct 2709771 ATCGTCAACCTCGCTCAAGATTATGTCGGTTCCAACAACCTCAACCTACTCCTCCCGAAC 2709712 Query 218791 GGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTT 218850 ||||||| |||| | ||| |||||| || || ||| || || ||||||||||| Sbjct 2709711 GGTCAGTATGGTACGCGTGATCAGGGTGGGAAAGACCATGCCTCCGCGAGGTATATCTTC 2709652 Query 218851 ACAAAGTTGTCGCCCGTGACGCGCCAGG----TGTTCAATCAGGCCGATGATGTGCTCCT 218906 || | ||||||| | ||| ||| |||| || | ||| |||| | ||| | Sbjct 2709651 ACCGAACTGTCGCCTCT----CGCGAGGACATTGTTTAACCCGGCGGATGGTCCGCTATT 2709596 Query 218907 TAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCC 218966 | |||| | |||| || | || |||||||||||||| || |||| ||||| Sbjct 2709595 GACGTATTTGAAGGAGGACAATGATTGGATTGAGCCCGAGTATTACATGCCGATCATTCC 2709536 Query 218967 GTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGG 219005 | ||||||| || || || | |||||||||||||| Sbjct 2709535 ACTGGTGCTCGTGAACGGCGCTGAAGGTATCGGGACAGG 2709497 >seq2 Length=2533528 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/201 (71%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || ||| ||| |||| ||||| || | || ||||| || || | ||| |||| Sbjct 2478532 CTCTCGTGTTGCTGTTCTTGGCCCCAACGGCTCTGGCAAGTCAACGCTCGTTAAACTCCT 2478473 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGAT 280276 | ||| || | || ||| |||| || | | |||||||| |||||| || || Sbjct 2478472 CATTGGTGACATGGAGCCCAACAAGGGCGGTGAGATCTGGAAGCACCCCAACTTGGTCAT 2478413 Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336 | ||||||||| || ||||| ||||||||||| || ||||||| |||| ||| ||| Sbjct 2478412 CGGTTACGTCGCCCAACACGCATTCCACCACATTGACCACCACCTCGACAAGACCCCTCT 2478353 Query 280337 CCAATACATTCAGTGGCGCTA 280357 | | ||||| | ||||| || Sbjct 2478352 CGAGTACATGCTCTGGCGTTA 2478332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835377730828