Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6 178 2e-39 seq1 158 2e-33 seq3 89.7 9e-13 seq5 84.2 4e-11 >seq6 Length=1690194 Score = 178 bits (196), Expect = 2e-39 Identities = 348/513 (68%), Gaps = 6/513 (1%) Strand=Plus/Plus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| ||||| || || ||||| | || || ||| ||| || || ||||| |||| Sbjct 492812 CATGACCCCAGTCACGTCGCGCGTCTAAATTGCCCAGGTACAAACAGTTTTGCTTCCCGA 492871 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403 | || | |||| | | |||| || | ||| ||||||||| ||| ||| || Sbjct 492872 GTTTTATATCCGCAACTGCTCTGCTGATCTTCCTGGTGACGAACGTCCTGCCTCGTCTAG 492931 Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463 |||||||||| ||||| | ||| ||||| ||||| |||| || ||||||||||| |||| Sbjct 492932 GGCTCTCGTGATTGAACAAGATACCGTTACACGCATACATCCCGTATGCCTCACGATAGT 492991 Query 268464 TCACGACCG---TCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGA 268520 | ||||| ||||||| ||| | | ||| || | | || || ||| || | || Sbjct 492992 T---GACCGTGATCCAGTAAGCATATAACTTGGCCGCACCATAGGGGCTACGAGGGTAGA 493048 Query 268521 AGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATG 268580 |||| || || ||| || || |||| ||||||||| | | ||||| || || | Sbjct 493049 AGGGTGTAGTCTCCTTCTGCGGCGTTTCAACGACTTTGCCGTACAATTCGGATGTGGAGG 493108 Query 268581 CTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAA 268640 ||||||||||| || ||| ||||| || | ||||| || || || | ||| | Sbjct 493109 CTTGGTAGAACCGGGTGTGTTTGTCGAGCCCAACTGTACGGATGGCGTCAAGAAGACGGA 493168 Query 268641 GAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACAT 268700 | || || | | || |||||||| || ||||| | ||||||||| || || | ||| | Sbjct 493169 GTGTGCCTACTGCGTCTACGTCCGCAGTGTACTCGGCCATCTCGAAGGAGACTTTGACGT 493228 Query 268701 GGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGA 268760 || ||| || || ||||| || | || ||| |||||| | ||| | || | Sbjct 493229 GGGACTGAGCACCGAGGTTGTATATTTCGCTCGGGAGGACCTGAGCAAGGATGTAGACCA 493288 Query 268761 GGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 || || ||| | ||||| |||||||||| Sbjct 493289 AATTGGTACTGTCAGAAAGGTCCCCGTAGTGCA 493321 >seq1 Length=3473262 Score = 158 bits (174), Expect = 2e-33 Identities = 163/212 (77%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 68251 ATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 |||||||| || || || ||||| || || ||||| || ||||| | || | ||||| Sbjct 2088752 ATACCAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCC 2088693 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | |||||||||||||| ||||| | || ||||| || || ||||| |||||||| Sbjct 2088692 TCAAGTTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCC 2088633 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| || |||||| || |||||||| | ||||| || ||||| |||||||| Sbjct 2088632 TGAATCTTCGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTC 2088573 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 2088572 TTGCCGGTCAATGTCTTGACGAAGATTTGCAT 2088541 Score = 136 bits (150), Expect = 7e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| || || || ||||| || || || || || | |||||| || | ||| Sbjct 2089021 GTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCATCCTCAAGCTG 2088962 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || | | ||| ||||| ||||| || || |||||||| || ||||| Sbjct 2088961 CTTGCCAGCAAAGATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTT 2088902 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||| ||| || || ||||| | || || |||||||| || ||||| || ||||| Sbjct 2088901 TGCCTTTACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAACGTAATGGTCTTCCCCGT 2088842 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 || ||||| ||||| ||||||||| Sbjct 2088841 CAGCGTCTTCACGAAAATCTGCATT 2088817 Score = 95.1 bits (104), Expect = 2e-14 Identities = 89/112 (79%), Gaps = 1/112 (1%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 |||||||||||||| || || |||||||| ||||| ||||| | || || || || Sbjct 2088138 CCTTCCTTGTCTTGGATTTTAGCCTTGACATTGTCGATAGTGTCGGAAGACTCCACCTCG 2088079 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT 68469 | ||||||||| || || ||||| ||||||||||| |||||||| || |||| Sbjct 2088078 AGGGTGATGGTCTTGCCAGTGAGTGTCTTGACGAAAATCTGCATAAT-CTAT 2088028 Score = 89.7 bits (98), Expect = 9e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 |||||||| || || | || | ||| || || |||||||| || ||||| ||||| || Sbjct 2088311 CCTCCGCGGAGACGGAGGACGAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCCGAT 2088252 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | |||||||||||||| Sbjct 2088251 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCGGGTGGG 2088192 Query 68355 ATGC 68358 |||| Sbjct 2088191 ATGC 2088188 >seq3 Length=2355184 Score = 89.7 bits (98), Expect = 9e-13 Identities = 174/247 (70%), Gaps = 19/247 (8%) Strand=Plus/Plus Query 10259 GCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTT 10318 ||||||||||||||| |||| ||| || || || ||||||||||| || || || || Sbjct 1065933 GCCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTT 1065992 Query 10319 GCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCAC-GCACAC 10375 || |||||| || | | ||| ||||| ||| |||||| |||||||| ||| | Sbjct 1065993 CTTCAACCAGAAGATAGAGGCGAAGGACCC--TGAAAAGAAGATGCCCTCCACAGCA-GC 1066049 Query 10376 CCAGGCGACGAGGCGCTCTGCGAA---GGAGCGGTCGCGCGAAAAGTATTTCGAG-GCCC 10431 | ||||| |||||||| ||||| ||| || | | || | | || ||| |||| Sbjct 1066050 GAATGCGACAAGGCGCTCGGCGAATGTGGAACGCTGGTCGGATATCCACTT-GAGAGCCC 1066108 Query 10432 ACGCTGCCTT---CTTTCCCACGGCAGGG-ATCGTCTCGATAGCCTCGAAGAGCTTGTTA 10487 | ||||||| ||| | |||||| || ||||| ||||| ||||| || || | Sbjct 1066109 AATCTGCCTTGCGCTTGAC----GCAGGGAATGGTCTCCATAGCATCGAAAAGGAAGTCA 1066164 Query 10488 CGCTCGG 10494 ||||||| Sbjct 1066165 CGCTCGG 1066171 >seq5 Length=1722318 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||||||||||||||| |||||| | Sbjct 381483 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCGTTG 381424 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| || ||||| || | | ||| ||||| || || Sbjct 381423 AGGGTGCGACCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGG 381364 Query 68355 ATGC 68358 |||| Sbjct 381363 ATGC 381360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621155809760