Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 105 2e-17 seq3 100 7e-16 >seq1 Length=3473262 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| | || || || || || | ||| || || |||||| Sbjct 2088731 TCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTCAAGTTGCTTCCCGGCGAAG 2088672 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || | || || || || || ||||| || |||||||| ||||| Sbjct 2088671 ATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTGAATCTTCGCTTTGACGTTA 2088612 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| || || | |||||| ||||| ||||||| ||||||||| Sbjct 2088611 TCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGCCGGTCAATGTCTTGACG 2088552 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 2088551 AAGATTTGCAT 2088541 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || ||||||||||| ||||| || || || || | |||| || || || ||| Sbjct 8234 CCCTCCTTGTCCTGGATTTTGGCTTTGACATTATCAATGGTATCGGAAGACTCCACCTCG 8175 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || ||||||||||| || || || ||||||||||| || ||||| |||| Sbjct 8174 AGGGTGATCGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATCTTGTT 8125 >seq3 Length=2355184 Score = 100 bits (110), Expect = 7e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 269150 TGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCT 269209 |||| || |||||||| | || ||| || ||||| |||||||| ||||| ||| | Sbjct 1065751 TGATTGGCATGAATGCGAAGCTGATGTGCCAGTATATTGAATTCGTCGCTGACCGTCTGC 1065692 Query 269210 TCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 | || | || |||| || | ||| | ||| || ||||||| ||||||||| Sbjct 1065691 TGGTATCATTGGGCAATGACAAGATCTACCACGCGACCAACCCCTTCGACTTTATGGATA 1065632 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 | || |||||| |||||||||| ||||||||||| |||||||| Sbjct 1065631 TGATATCGCTCCAAGGAAAGACCAACTTCTTCGAGAAGCGTGT 1065589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652767653224