Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 seq1 86.0 7e-12 >seq3 Length=2355184 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||| ||||| |||||||||||| || || ||||| ||||| |||||| Sbjct 1065934 CCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTC 1065993 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 ||||||||||| || | || || || || |||||||| ||||||||| ||||| Sbjct 1065994 TTCAACCAGAAGATAGAGGCGAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAAT 1066053 Query 126185 GCAAAGAGACGCTCAGCAAA 126204 || | || ||||| || || Sbjct 1066054 GCGACAAGGCGCTCGGCGAA 1066073 >seq1 Length=3473262 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 172797 ACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAA 172856 |||| ||||| ||||| || || ||| ||| ||| || || || || ||||| |||| Sbjct 2710782 ACTTTCCACGAAGAGGAAAGACGCCGAAGTAATCTCGCCCGACGACCCCGAGACCGGCAA 2710841 Query 172857 CTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAG-ATTGT 172915 | || || | || ||||||||||| || |||| ||||||||| || | |||| ||| | Sbjct 2710842 CCGCAAGCGCTTTAGCGGAATCACCTTCTGTCAAGATGAGCGTGCATTGCCCAGCATTCT 2710901 Query 172916 GCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGT 172959 || || || |||||||| || | ||||| |||||||| Sbjct 2710902 -TTGTACCAGCATTGTTCGCGTCCGAAAGCTTGGTCATACCAGT 2710944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352793572640