Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq5 87.8 2e-12 seq8 82.4 8e-11 >seq1 Length=3473262 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| || || || || ||||||||||| || | | || || | || ||||| Sbjct 2088746 AGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTCAAGT 2088687 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| ||||| | ||||| ||||||||||| || || || || || || || || | | Sbjct 2088686 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTG-AAT 2088628 Query 64358 TTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCC 64416 || ||||| || || | || ||| || || || || | || | ||||||||| Sbjct 2088627 CTTCGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGCC 2088568 Query 64417 GGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || || ||||| |||||||| Sbjct 2088567 GGTCAATGTCTTGACGAAGATTTGCAT 2088541 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || ||||||||||| || | | |||||| | || |||||||||||||| ||| | Sbjct 2089009 TTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCATCCTCAAGCTGCTTGCCAGCAAA 2088950 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 || | || |||||||| || || || || || || || || || ||| |||||| Sbjct 2088949 GATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTTACGTT 2088890 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || || || ||||| | || | |||||| || |||| || || || Sbjct 2088889 GTCAATCGTGTCCGAGGACTCGACTTCCAACGTAATGGTCTTCCCCGTCAGCGTCTTCAC 2088830 Query 64432 GAAAATTTGCATT 64444 |||||| |||||| Sbjct 2088829 GAAAATCTGCATT 2088817 >seq5 Length=1722318 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | |||||| || |||| || || |||||||| ||||||||||| Sbjct 381484 ACCACCACGCAGGCGAAGCACCAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCGTT 381425 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||||||||||||||| || || | || | || |||||||| || || Sbjct 381424 GAGGGTGCGACCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGGGG 381365 Query 64336 AAT 64338 || Sbjct 381364 GAT 381362 >seq8 Length=1450735 Score = 82.4 bits (90), Expect = 8e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 153816 TGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTTTTTACTGCTC 153875 ||||| ||| |||||| ||||| || || || ||||||||||| | || || ||| Sbjct 938288 TGGCTTTGACAGATGAACGCGCCACGGTCCGCGGCCATGTCAATGACTTTCTTCTGGCTA 938347 Query 153876 ATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATG 153920 || ||||| || || ||||| | |||||| |||||||| |||||| Sbjct 938348 ATCTCCCAGACGGTCTTGTATATGGCTTTGATGTCGTCTGGTATG 938392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644125479520