Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 seq3 93.3 4e-14 seq5 86.0 6e-12 >seq1 Length=3473262 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| || || ||||| || || ||||| ||| || | |||||| ||| Sbjct 2088509 GTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAACTGTTTCCCA 2088450 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || ||||| || ||||| || |||||||||||| || ||| ||| Sbjct 2088449 GCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTC 2088390 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| |||| ||| || || | ||| | || || || |||| || Sbjct 2088389 ACGTTG-TCGATGGTATCCGACGACTCAACCTCAAGGGTGATGGTCTTCCCTGTCAAGGT 2088331 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 ||| || || || |||||| || Sbjct 2088330 TTTGACGAAGATTTGCATGCCT 2088309 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 126923 TCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAG 126982 || || ||||| ||||| || | ||||| ||| || ||||| || ||||| || Sbjct 2089008 TCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCATCCTCAAGCTGCTTGCCAGCAAAG 2088949 Query 126983 ATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTG 127041 ||||| || ||||| || || || || |||||||||||| ||| || ||| | |||| Sbjct 2088948 ATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTTACGTTG 2088889 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 | | | ||||||| ||||||||| | || | || || || ||||| || || || Sbjct 2088888 T-CAATCGTGTCCGAGGACTCGACTTCCAACGTAATGGTCTTCCCCGTCAGCGTCTTCAC 2088830 Query 127102 AAAAATCTGCAT 127113 ||||||||||| Sbjct 2088829 GAAAATCTGCAT 2088818 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | |||||||| || ||||| ||||| ||| | || ||| ||| || Sbjct 2088750 ACCAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTC 2088691 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || || || || ||| |||| | |||||||| || || |||||||||||||||||| Sbjct 2088690 AAGTTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTG 2088631 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || ||| |||| | || | |||||| | || || || | || | || || Sbjct 2088630 AATCTTCGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTT 2088571 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || || || || ||||| Sbjct 2088570 GCCGGTCAATGTCTTGACGAAGATTTGCAT 2088541 >seq3 Length=2355184 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 47388 GAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAA 47447 || ||||| |||| || | | || ||||| ||| || ||||| | |||| || ||| Sbjct 1065770 GATGCTCTCCCCGTCTCCCTGATTGGCATGAATGCGAAGCTGATGTGCCAGTATATTGAA 1065711 Query 47448 TTTGTCGCCGACCGCCTGCTCGT-TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAA 47506 || ||||| ||||| ||||| || ||| | || |||||| |||||| | || Sbjct 1065710 TTCGTCGCTGACCGTCTGCTGGTATCAT-TGGGCAATGACAAGATCTACCACGCGACCAA 1065652 Query 47507 TCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCG 47566 || ||||| |||||| | | || |||||| | || ||||||||||| ||||||||||| Sbjct 1065651 CCCCTTCGACTTTATGGATATGATATCGCTCCAAGGAAAGACCAACTTCTTCGAGAAGCG 1065592 Query 47567 CGT 47569 || Sbjct 1065591 TGT 1065589 >seq5 Length=1722318 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | |||||||||||||| || ||||||||| Sbjct 381486 GCACCACCACGCAGGCGAAGCACCAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCG 381427 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | |||||| || || ||||| ||||||||| ||||||| || ||||| || || Sbjct 381426 TTGAGGGTGCGACCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGG 381367 Query 127004 GGTATGC 127010 || |||| Sbjct 381366 GGGATGC 381360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500158073920