Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 109 7e-19 seq1 86.0 8e-12 >seq3 Length=2355184 Score = 109 bits (120), Expect = 7e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| ||| ||||| |||||||||||| ||||| ||||| ||||| |||||| Sbjct 1065934 CCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTC 1065993 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 ||||||||||| || | || || || || |||||||| ||||||||| ||||| Sbjct 1065994 TTCAACCAGAAGATAGAGGCGAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAAT 1066053 Query 127658 GCAAATAGACGCTCGGCAAA 127677 || | || |||||||| || Sbjct 1066054 GCGACAAGGCGCTCGGCGAA 1066073 >seq1 Length=3473262 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 176817 ACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAA 176876 |||| || || ||||| || || ||| ||| ||| || || || || |||||| |||| Sbjct 2710782 ACTTTCCACGAAGAGGAAAGACGCCGAAGTAATCTCGCCCGACGACCCCGAGACCGGCAA 2710841 Query 176877 CTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAG-ATTGT 176935 | || || | || ||||||||||| || |||| ||||||||| || | |||| ||| | Sbjct 2710842 CCGCAAGCGCTTTAGCGGAATCACCTTCTGTCAAGATGAGCGTGCATTGCCCAGCATTCT 2710901 Query 176936 GCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGT 176979 || || || |||||||| || | ||||| |||||||| Sbjct 2710902 -TTGTACCAGCATTGTTCGCGTCCGAAAGCTTGGTCATACCAGT 2710944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506371765280