Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq1 104 3e-17 seq46 82.4 9e-11 seq9 82.4 9e-11 >seq3 Length=2355184 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| || ||| ||| || ||||| |||||| || || ||||| ||||| |||||| Sbjct 1065934 CCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTC 1065993 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 |||||||| | |||| | ||| ||||| || |||||||| ||||||||| || || Sbjct 1065994 TTCAACCAGAAGATAGAGGCGAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAAT 1066053 Query 117412 GCAAAAAGGCGCTCGGCGAA 117431 || | ||||||||||||||| Sbjct 1066054 GCGACAAGGCGCTCGGCGAA 1066073 >seq1 Length=3473262 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 169341 GCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCA 169400 || || || |||||| |||| ||||| |||||||||||||| ||| ||| || || Sbjct 2710763 GCCTCCCGCACATTCAGCAACTTTCCACGAAGAGGAAAGACGCCGAAGTAATCTCGCCCG 2710822 Query 169401 ACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGG 169460 ||||| |||||| || |||||||| | ||| || |||||||| || || | ||||| Sbjct 2710823 ACGACCCCGAGACCGGCAACCGCAAGCGCTTTAGCGGAATCACCTTCTGTCAAGATGAGC 2710882 Query 169461 GTACACTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCA 169520 || || | |||| | | ||||| || ||||| ||||| | ||||| |||||| Sbjct 2710883 GTGCATTGCCCAGCATTCTTTGTACCAGCATTGTTCGCGTCCGAAAGCTTGGTCATACCA 2710942 Query 169521 GT 169522 || Sbjct 2710943 GT 2710944 >seq46 Length=121884 Score = 82.4 bits (90), Expect = 9e-11 Identities = 125/177 (71%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 155032 CCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATT 155091 ||||| | ||| ||||| | |||||||||| || || || |||| ||| | |||||| Sbjct 11982 CCAAAGGATGT-TATGGAAGGATTGCACCACGTTCTGGCCTAGCTGCCAAGAACGGTATT 11924 Query 155092 CAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTC 155151 | |||||||| ||||| || ||| |||||||| || | |||||| | || || Sbjct 11923 GACGTTGGTGCCGGTGTCATAGATTCCGACTATCATGGCATCATAAAAGTCCTACTGTTT 11864 Query 155152 AATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTC 155208 || |||||||||||| || || |||| || || ||||| |||||| || Sbjct 11863 AACTTATCCGACAAAGACTTTAGAGTCAACCAAGGTGACCGAATCGCCCAACTTATC 11807 >seq9 Length=1044437 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 155054 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 155113 |||||||| | || || || |||| ||| |||||||| | |||||||| |||||||||| Sbjct 557667 TTGCACCATGTTCTGGCCTAGCTGCTAAGAATGGTATTGATGTTGGTGCTGGTGTTATTG 557726 Query 155114 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAA 155153 || | |||||| ||| || ||||| |||||||||| Sbjct 557727 ATTCTGACTATCAAGGCACTGTAAAAGTTCTTCTCTTCAA 557766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980003525920