Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 3e-13 seq1 93.3 3e-13 >seq6 Length=1690194 Score = 93.3 bits (102), Expect = 3e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| | || || || || || || ||||| | ||||| ||||||||||| |||| Sbjct 1588265 ATGCAGTCGTCACAGTACCCGCTTACTTCAATGACGCACAACGGCAAGCAACTAAGGATG 1588324 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||||||||||| | || | ||| | || || || || || || || |||| Sbjct 1588325 CTGGTCAAATTGCAGGTCTTGACGTGCTTCGTGTCATCAACGAGCCTACCGCTGCTGCAC 1588384 Query 474855 TTGCTTATGGTCTTGA 474870 |||| |||||||| || Sbjct 1588385 TTGCCTATGGTCTCGA 1588400 >seq1 Length=3473262 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || || ||||| ||| ||||| | || || |||| ||||| Sbjct 2088534 ACGGAGACGCAGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGT 2088475 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || | || || |||||||| ||||||||||| || ||||||||||| || Sbjct 2088474 GCGGCCATCCTCCAACTGTTTCCCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACC 2088415 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| |||||||| || || || || ||||| | | | || |||| Sbjct 2088414 CTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTATCCGACGACTCAA-CCTCAA 2088356 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || || | || || ||||| ||||| Sbjct 2088355 GGGTGATGGTCTTCCCTGTCAAGGTTTTGACGAAGATTTG 2088316 Score = 86.0 bits (94), Expect = 4e-11 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||||||||| ||| || || || || || || | || ||| | ||| |||| Sbjct 2088748 CAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTCAA 2088689 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||| || || || || ||||| || || ||||| || || || |||||||| |||| Sbjct 2088688 GTTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTGAA 2088629 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 |||| |||||| ||||| || |||| | | | || | || || || || | Sbjct 2088628 TCTTCGCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGC 2088569 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 |||| | ||||| ||||| ||||| Sbjct 2088568 CGGTCAATGTCTTGACGAAGATTTG 2088544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268174567355984