Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq1 98.7 1e-15 seq46 82.4 9e-11 seq9 82.4 9e-11 >seq3 Length=2355184 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 ||||||||||||||| | || || || ||||||||| |||||||| || ||||| ||| Sbjct 1066073 TTCGCCGAGCGCCTTGTCGCATTCGCTGCTGTGGAGGGCATCTTCTTTTCAGGGTCCTTC 1066014 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | |||| | |||||||||||||| ||||| ||||| || || |||||| ||||| Sbjct 1066013 GCCTCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCGAATGAG 1065954 Query 65191 CTTATTTCCCGAGATGAGGG 65210 || ||| ||| || ||||| Sbjct 1065953 CTCATTAGCCGCGACGAGGG 1065934 >seq1 Length=3473262 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 13550 ACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAAT-CTGGAAAGTG 13608 || ||||| ||||| | ||||||||||| || ||||| | ||| |||| | || Sbjct 2710944 ACTGGTATGACCAAGCTTTCGGACGCGAACAATGCTGGTAC-AAAGAATGCTGGGCAATG 2710886 Query 13609 TACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGT 13668 || ||||| | ||||| |||||||| |||||| | || |||||||| |||||| || Sbjct 2710885 CACGCTCATCTTGACAGAAGGTGATTCCGCTAAAGCGCTTGCGGTTGCCGGTCTCGGGGT 2710826 Query 13669 CGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGA 13728 ||| || || ||| ||| ||| || || || ||||| || || | |||||| ||||| Sbjct 2710825 CGTCGGGCGAGATTACTTCGGCGTCTTTCCTCTTCGTGGAAAGTTGCTGAATGTGCGGGA 2710766 Query 13729 CGC 13731 || Sbjct 2710765 GGC 2710763 >seq46 Length=121884 Score = 82.4 bits (90), Expect = 9e-11 Identities = 125/177 (71%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 27867 GACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTGATTGAA 27926 || |||||| ||||| || || |||| || || |||||||||||| || || Sbjct 11807 GATAAGTTGGGCGATTCGGTCACCTTGGTTGACTCTAAAGTCTTTGTCGGATAAGTTAAA 11866 Query 27927 GAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACTTGAAT 27986 || | |||||| | || |||||||| ||| || ||||| |||||||| | ||| Sbjct 11867 CAGTAGGACTTTTATGATGCCATGATAGTCGGAATCTATGACACCGGCACCAACGTCAAT 11926 Query 27987 ACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATACACACCATTTGG 28043 ||| | ||| |||| || || || |||||||||| | ||||| ||| | ||||| Sbjct 11927 ACCGTTCTTGGCAGCTAGGCCAGAACGTGGTGCAATCCTTCCATA-ACATCCTTTGG 11982 >seq9 Length=1044437 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 27922 TTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACT 27981 |||||||||| ||||| || ||| |||||| | |||||||||||| |||||||| Sbjct 557766 TTGAAGAGAAGAACTTTTACAGTGCCTTGATAGTCAGAATCAATAACACCAGCACCAACA 557707 Query 27982 TGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAA 28021 | |||||||| ||| |||| || || || | |||||||| Sbjct 557706 TCAATACCATTCTTAGCAGCTAGGCCAGAACATGGTGCAA 557667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568794631040