Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq3 87.8 2e-12 >seq1 Length=3473262 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || | || | || |||||||| || ||||| || |||||| Sbjct 2088972 TCCTCAAGCTGCTTGCCAGCAAAGATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTG 2088913 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||| | | |||| |||||| | || ||| || || | || | | Sbjct 2088912 TCCTGGATCTTTGCCTTTACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAACGTAATG 2088853 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || || |||||||||||||| Sbjct 2088852 GTCTTCCCCGTCAGCGTCTTCACGAAAATCTGCAT 2088818 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | || ||| | ||||| || ||||| || Sbjct 2088737 GTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCA-TCCTCAAGTTGCTTCCC 2088679 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| || || ||||| |||||||| ||||| || Sbjct 2088678 GGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTGAATCTTCGCTTT 2088619 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | || || || || | |||| ||| |||||||||| || Sbjct 2088618 GACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGCCGGTCAATGT 2088559 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 2088558 CTTGACGAAGATTTGCAT 2088541 >seq3 Length=2355184 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 120638 ACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACG 120697 |||| || |||||||| || |||| |||||||||||| || ||||| || || | Sbjct 1065908 ACAGACAAGCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGG 1065967 Query 120698 TCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAA 120757 | || |||||||| | || | |||| | |||| || | ||| ||| || |||| Sbjct 1065968 TAAGACCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCGAAGGACCCTGAAA 1066027 Query 120758 AGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC 120817 |||| | ||||||||| || || ||||| | ||||||||| || || | || | Sbjct 1066028 AGAAGATGCCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAATGTGGAACGCTGGT 1066087 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTT 120848 | |||||||| | ||||| || ||||| Sbjct 1066088 CGGATATCCACTTGAGAGCCCAATCTGCCTT 1066118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420147381920