Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 104 6e-17 >seq1 Length=3473262 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | ||||| || || ||||| | || || || || || || |||| Sbjct 2088327 CAAAACCTTGACAGGGAAGACCATCACCCTTGAGGTTGAGTCGTCGGATACCATCGACAA 2088386 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || ||| || ||| ||| | |||||||| Sbjct 2088387 CGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAGCAACGTCTTATCTT 2088446 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || |||||||| ||||| | ||| || | || |||||| ||||||||||||| Sbjct 2088447 TGCTGGGAAACAGTTGGAGGATGGCCGCACTCTGTCTGACTACAACATCCAGAAAGAGTC 2088506 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| |||||||| ||| || | || || Sbjct 2088507 TACCCTTCACCTCGTTCTGCGTCTCCG 2088533 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| ||||| || ||| |||||||| | || || ||||| Sbjct 2088565 ACCGGCAAGACCATCACGTTGGAGGTTGAATCCTCTGACACCATTGATAACGTCAAAGCG 2088624 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || |||||| || || || || || ||| ||| || | || ||||||||||| || Sbjct 2088625 AA-GATTCAGGACAAGGAGGGCATACCGCCTGACCAGCAGCGTCTCATCTTCGCCGGGAA 2088683 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| | || ||||| | ||||| |||| |||||| | ||||| |||||||||||||| Sbjct 2088684 GCAACTTGAGGATGGTCGTACTTTATCCGACTACAACATTCAGAAGGAGTCTACTCTTCA 2088743 Query 206373 CCTTG 206377 |||| Sbjct 2088744 TCTTG 2088748 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | || ||| |||||||| |||||||||||||||| || ||||||| || ||| Sbjct 2088533 CGGAGACGCAGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTG 2088474 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| |||| ||| || || || |||||||| ||||| || Sbjct 2088473 CGGCCATCCTCCAACTGTTTCCCAGCAAAGATAAGACGTTGCTG 2088430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819164655468