Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 113 6e-20 seq1 89.7 6e-13 seq46 82.4 1e-10 seq9 82.4 1e-10 >seq3 Length=2355184 Score = 113 bits (124), Expect = 6e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| || ||| ||| || ||||| |||||| ||||| ||||| ||||| |||||| Sbjct 1065934 CCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTC 1065993 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||||||| | |||| | ||| ||||| || |||||||| ||||||||| || || Sbjct 1065994 TTCAACCAGAAGATAGAGGCGAAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAAT 1066053 Query 122797 GCAAAAAGGCGTTCGGCGAA 122816 || | |||||| |||||||| Sbjct 1066054 GCGACAAGGCGCTCGGCGAA 1066073 >seq1 Length=3473262 Score = 89.7 bits (98), Expect = 6e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 182676 GCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCA 182735 || ||||| |||||| | || || ||||| || || || ||| ||| ||| || || Sbjct 2710763 GCCTCCCGCACATTCAGCAACTTTCCACGAAGAGGAAAGACGCCGAAGTAATCTCGCCCG 2710822 Query 182736 ACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGA 182795 ||||| |||||| |||||||| || | ||| || |||||||| || || | ||||| Sbjct 2710823 ACGACCCCGAGACCGGCAACCGCAAGCGCTTTAGCGGAATCACCTTCTGTCAAGATGAGC 2710882 Query 182796 GTACACTTTCCAG-ATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACC 182854 || || | |||| ||| | ||||| || ||||||||||| | ||||| ||||| Sbjct 2710883 GTGCATTGCCCAGCATTCTTT-GTACCAGCATTGTTCGCGTCCGAAAGCTTGGTCATACC 2710941 Query 182855 GGT 182857 || Sbjct 2710942 AGT 2710944 >seq46 Length=121884 Score = 82.4 bits (90), Expect = 1e-10 Identities = 125/177 (71%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 164592 CCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATT 164651 ||||| | ||| ||||| | |||||||||| || || || |||| ||| | |||||| Sbjct 11982 CCAAAGGATGT-TATGGAAGGATTGCACCACGTTCTGGCCTAGCTGCCAAGAACGGTATT 11924 Query 164652 CAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTC 164711 | |||||||| ||||| || ||| |||||||| || | |||||| | || || Sbjct 11923 GACGTTGGTGCCGGTGTCATAGATTCCGACTATCATGGCATCATAAAAGTCCTACTGTTT 11864 Query 164712 AATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTC 164768 || |||||||||||| || || |||| || || ||||| |||||| || Sbjct 11863 AACTTATCCGACAAAGACTTTAGAGTCAACCAAGGTGACCGAATCGCCCAACTTATC 11807 >seq9 Length=1044437 Score = 82.4 bits (90), Expect = 1e-10 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 164614 TTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATTG 164673 |||||||| | || || || |||| ||| |||||||| | |||||||| |||||||||| Sbjct 557667 TTGCACCATGTTCTGGCCTAGCTGCTAAGAATGGTATTGATGTTGGTGCTGGTGTTATTG 557726 Query 164674 ATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAA 164713 || | |||||| ||| || ||||| |||||||||| Sbjct 557727 ATTCTGACTATCAAGGCACTGTAAAAGTTCTTCTCTTCAA 557766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031152156800