Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq6 91.5 2e-13 seq8 84.2 2e-11 >seq3 Length=2355184 Score = 107 bits (118), Expect = 2e-18 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || |||| ||| || || | ||| || | |||||||| || | ||| || Sbjct 1065916 GCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAGCTCATTCGAGAAGGTAAGACCG 1065975 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 |||||||| || |||||||||||||| ||||| | |||||| || ||||||||| Sbjct 1065976 GGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCGAAGGACCCTGAAAAGAAGATG 1066035 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----AT 74926 || || ||| || || ||||||||||| | ||||| ||| | || ||| || Sbjct 1066036 CCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAA-TGTGGAACGCTGGTCGGATAT 1066094 Query 74927 CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGA 74967 ||| | ||||||| || || || || |||| |||||||| Sbjct 1066095 CCACTTGAGAGCCCAATCTGCCTTGCGCTTGA-CGCAGGGA 1066134 >seq6 Length=1690194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 124712 CTCGTGGTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTT 124771 |||||| ||||||| || || |||||||| |||||||||| | ||| || ||||| Sbjct 492936 CTCGTGATTGAACAAGATACCGTTACACGCATACATCCCGTATGCCTCACGATAGTTGAC 492995 Query 124772 CGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 ||| ||||| || || | | ||||| | | ||||||||||| || |||||||| |||| Sbjct 492996 CGTGATCCAGTAAGCATATAACTTGGCCGCACCATAGGGGCTACGAGGGTAGAA--GGGT 493053 Query 124832 GT 124833 || Sbjct 493054 GT 493055 >seq8 Length=1450735 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/186 (70%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 55093 ATTTGACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGT 55152 || |||||| | ||||| || || |||||| || || || ||||||||||| | Sbjct 939071 ATATGACTTCCAAAAGCTCCATGATGTGACGAAGGTCGTTACGTATAACCTGAACCGCAT 939012 Query 55153 CATCGACAAGAATTACTACCCGA---CTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCG 55209 ||||||| || ||||| || | ||||| || |||| |||||| | || ||||| Sbjct 939011 CATCGACGTCAACTACTATCCCATCCCTGAA---GCCCGCAGATCCAACATGCGTCACCG 938955 Query 55210 GCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTT 55269 ||||||| ||| || || ||||| | || || ||||||||| || | | ||||| Sbjct 938954 TCCCATCGGCATTGGCGTGCAGGGTCTTGCGGATGCCTTCATGATTCTTCGTCTACCCTT 938895 Query 55270 CGACTC 55275 ||| || Sbjct 938894 CGATTC 938889 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||| | || ||| ||| || ||||||||| ||||||| | ||||||||| | Sbjct 938378 TCAAAGCCATATACAAGACCGTCTGGGAGATTAGCCAGAAGAAAGTCATTGACATGGCCG 938319 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT-CTTCATGGAGAATCCT 55846 | || ||||| |||| |||| || ||| ||||||| | || || | || Sbjct 938318 CGGACCGTGGCGCGTTCATCTGTCAAAGCCAAAGCATGAACATTCATCTGCAAGCACCCA 938259 Query 55847 TCACTGGCCAAGTT--GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 || ||| ||| | |||| |||||||||||||| ||||| || ||||||||||| | Sbjct 938258 CCATTGGTCAACTGACGAGC---ATGCACTTTTACGGATGGAAAAAAGGACTCAAGACTG 938202 Query 55905 GTATGTACTATCTGCGGACCCG 55926 | |||||||| || || || || Sbjct 938201 GAATGTACTACCTTCGCACACG 938180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215261258400