Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 seq8 143 3e-29 seq12 86.0 7e-12 >seq1 Length=3473262 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || | || || ||||| || || |||||||||||||| Sbjct 2088313 ATGCAAATCTTCGTCAAAACCTTGACAGGGAAGACCATCACCCTTGAGGTTGAGTCGTCG 2088372 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || ||||||| || ||||||||||||||||| |||||||| |||||| Sbjct 2088373 GATACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 2088432 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || |||||||| || || | ||||||| || || || | ||||| || Sbjct 2088433 CAACGTCTTATCTTTGCTGGGAAACAGTTGGAGGATGGCCGCACTCTGTCTGACTACAAC 2088492 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || ||||| || || ||||||| || ||||| Sbjct 2088493 ATCCAGAAAGAGTCTACCCTTCACCTCGTTCTGCGTCTCCGTGGTGG 2088539 Score = 168 bits (186), Expect = 8e-37 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| | ||||||||||| || || | |||||||| || | Sbjct 2088541 ATGCAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACGTTGGAGGTTGAATCCTCT 2088600 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | || || || ||||||||||||||||| || || || |||||| Sbjct 2088601 GACACCATTGATAACGTCAAAGCGAAGATTCAGGACAAGGAGGGCATACCGCCTGACCAG 2088660 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || |||||||| ||||||| |||||| || | ||||| || Sbjct 2088661 CAGCGTCTCATCTTCGCCGGGAAGCAACTTGAGGATGGTCGTACTTTATCCGACTACAAC 2088720 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||| || ||||||||||| Sbjct 2088721 ATTCAGAAGGAGTCTACTCTTCATCT 2088746 Score = 131 bits (144), Expect = 2e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || |||||||| || || ||||| ||||| | || || ||||| Sbjct 2088817 AATGCAGATTTTCGTGAAGACGCTGACGGGGAAGACCATTACGTTGGAAGTCGAGTCCTC 2088876 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | ||||| || || |||||||||||||| || || || ||||| Sbjct 2088877 GGACACGATTGACAACGTAAAGGCAAAGATCCAGGACAAGGAGGGTATCCCACCTGACCA 2088936 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||| | || |||||||| ||||| || ||||||| || || || | ||||| || Sbjct 2088937 GCAACGTTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGCACTCTTTCTGACTACAA 2088996 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 | || |||||| ||||||||| || Sbjct 2088997 CATTCAGAAGGAAAGCACTCTTCACCT 2089023 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || ||||| || || || ||||| ||||| Sbjct 8131 ATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACGATCACCCTCGAGGTGGAGTCTTCC 8190 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||||| ||| | || || ||||| |||||||||||||| Sbjct 8191 GATACCATTGATAATGTCAAAGCCAAAATCCAGGACAAGGAGGG 8234 >seq8 Length=1450735 Score = 143 bits (158), Expect = 3e-29 Identities = 216/303 (71%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 80713 ATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTC 80772 |||||||| | || || || ||||| ||||| ||| |||| || ||||| ||| |||| Sbjct 938910 ATCATGAAGGCATCCGCAAGACCCTGCACGCCAATGCCGATGGGACGGTGACGCATGTTG 938969 Query 80773 GATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGT 80832 |||| ||| || || || || || |||| ||||||| |||||||||||| Sbjct 938970 GATCTGCGGGCTTCAGGGATGGGATAGTAGTTGACGTCGATGATGCGGTTCAGGTTATAC 939029 Query 80833 GTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAAAT 80892 ||||| ||| || |||||||| || || || ||||| ||| |||| | | | || Sbjct 939030 GTAACGACCTTCGTCACATCATGGAGCTTTTGGAAGTCATATT--TTCCGTTCGAAATAT 939087 Query 80893 --GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG--CATCTGTAAA 80948 | |||||| ||||| |||| |||||| || || || || | | |||| | Sbjct 939088 AAGTCGGAAGCGCAAGGGAAGCCAAATTGCAAACAGCGGTTTCCTCTGGTGAGCTGT--A 939145 Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008 |||| ||| || ||||||||||| |||||||| || || || |||||||| || ||||| Sbjct 939146 TTCGATGATCTCAGTGCACAAATTTGAAGACTTGATCGTCCCTAGGTTTTTTTGATTTGA 939205 Query 81009 CTT 81011 ||| Sbjct 939206 CTT 939208 >seq12 Length=729480 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||| | ||| | || |||||| | || |||||| | |||| | Sbjct 598682 ATGCAAATCTTCATCAAAATGCTCATTGGAAAGACTGTCACCCTTGAGATAGAGTTTTTT 598623 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || ||||| |||| ||| ||| | || ||||| Sbjct 598622 GACACTATTGACAACATTAAGACAAAGATCCAGGATAAGGGGGGGATTTCACCTAACCAG 598563 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 || | ||| |||||| ||||||| |||| ||||| Sbjct 598562 CAACATCTCATTTTTACTGGTAAATAACTGGAGGA 598528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309630080960