Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq54 111 4e-19 seq1 95.1 3e-14 >seq54 Length=43308 Score = 111 bits (122), Expect = 4e-19 Identities = 90/108 (83%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| |||||||| || || ||||| | ||||||||| | | |||||| ||||| | Sbjct 16154 ATACTTCTGGATGACCGAAGAACCAGAAAAGATGTTGATATAAAACAGGATCACCTCCAC 16095 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||| ||||||| | || |||||||||||||||||||||||||| |||| Sbjct 16094 CTGCTGGATCATAGAAACTAGTATTAAAATTTCTATCAGTTAATAACA 16047 Score = 105 bits (116), Expect = 2e-17 Identities = 193/281 (69%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 |||||||| ||| | ||| | ||||| || |||||| |||||||| | || || Sbjct 14176 TATTTAATTTTTTCTATTTTTGCAGGTATGATTGGTACTGCTTTTTCTATATTAATTAGA 14235 Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTT 7566 |||||||||||||| || ||| ||| | || ||| || || | | || || Sbjct 14236 TTAGAATTAGCTGCACCAGGTGTACAATTTTTACAAGGTGATCATCAGTTGTTTAATGTA 14295 Query 7567 ATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGC 7626 ||||| | || ||||| ||| | ||||| |||||| | || ||||| | | | |||| Sbjct 14296 ATTATAAGTGCTCATGCTTTTATAATGATATTCTTTATGGTAATGCCTGGTCTAGTAGGT 14355 Query 7627 GGTTTCGGAAATTGATTCGTTCC--TTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684 || || || |||| || | || || |||| ||| || ||||||||||| || || | Sbjct 14356 GGATTTGGTAATTATTTATTACCAGTTCAATG--TGGAGCACCTGATATGGCATTCCCTA 14413 Query 7685 GGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 | | || ||||| ||||| ||| |||| || || ||| Sbjct 14414 GATTAAATAATATTTCATTTTGGTTATTACCACCATCATTA 14454 >seq1 Length=3473262 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || ||||| || | |||||||| | | ||| | ||||| Sbjct 2088296 AGGACGAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCCGATAGAGTGCGGCCATCC 2088237 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||| |||||||||||||| || ||||||||||| || || Sbjct 2088236 TCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCGGGTGGGAT 2088190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529549834952