Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3 136 5e-27 seq8 93.3 6e-14 >seq3 Length=2355184 Score = 136 bits (150), Expect = 5e-27 Identities = 381/580 (66%), Gaps = 16/580 (3%) Strand=Plus/Plus Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182 ||||| | |||| | ||| ||||| || ||| | || || || | ||||| | Sbjct 1065895 AAATGACTGAACAACAGACAAGCAAAGTCGGTATGCATGCCCTCGTCGCGGCTAATGAGC 1065954 Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 || || || || || ||||||||||| || || || || || | ||| || || | ||| Sbjct 1065955 TCATTCGAGAAGGTAAGACCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCG 1066014 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || |||||||| ||||| || || || || |||||| ||| | ||| || | Sbjct 1066015 AAGGACCCTGAAAAGAAGATGCCCTCCACAGCAGCGAATGCGACAAGGCGCTCGGCGAAT 1066074 Query 48303 CTGG---CTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| | || | ||||||| | |||||||| ||||| ||| || || || Sbjct 1066075 GTGGAACGCTGGTCGGATATCCACTTGAGAGCCCAATCTGCCTTGCGCTTGACGCAGGGA 1066134 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCT--ATCTTTAACGTAAGTAT 48417 || || || ||||||| || || |||| || ||| || || | || || | Sbjct 1066135 ATGGTCTCCATAGCATCGAAAAGGAAGTCACGCTC--GGCTGGGTCCTTGATATAGGTGT 1066192 Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477 | || | ||| || |||| || || ||||| || || || || || ||||||| Sbjct 1066193 CGATAAGGAGAGAGTAGGTTTCAGAATGGATATTCTCCATCATGATTTGGAAGCCGTAAA 1066252 Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537 | || | ||||| | ||| || || | | || || || ||||||| || || | Sbjct 1066253 AGCAACGGGCTTCAGCAGCCTGCACTTCGTTCGAGAAGCGCTCCACCAAATTTTCGTTAA 1066312 Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA------TTTTT 48591 | || ||||| |||||| |||||||| | ||| | || || || || | Sbjct 1066313 CAATACCATCTGAAGCAGCGAAAAATGCAAGGACACGGGATATGAAGTAACGCTCGTTGT 1066372 Query 48592 CGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 48651 ||||| || | | || ||||||||| |||||| || || | || | |||||||| | Sbjct 1066373 CGTTG--AGAC-GATTGGTCCAGTCATGGATATCCTTGGAGAGGTCCATCTCTTCAGCCG 1066429 Query 48652 TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 |||| || || || || || || || ||||| | ||| || Sbjct 1066430 TCCAGAACGAGGCTTCAGCCTTCTTGTACATTTGCCAGAT 1066469 >seq8 Length=1450735 Score = 93.3 bits (102), Expect = 6e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||||||| |||||| || ||| ||| || || || | | ||||| || || Sbjct 939531 AAGAGATCACATATCCAGAGGGCATAAAACAGGTCACGCGCACGTGCCTCTTCTTTACCA 939590 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | ||||||| ||| || | || ||| ||||| || || ||||||||| Sbjct 939591 TGATTCTTCCTGAGATCGATAAAGTCGAAAACATCGCTGTGCCAGGGCTCGAGATATATT 939650 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || |||||||| |||||||| || | |||| ||||| | ||| Sbjct 939651 GCGAAGGCCCCCGGACGTTTATTGCCTCCCTGGTCAACGTATCGAGCGGTAGCGTCATAT 939710 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 | | |||||| || | ||| || ||||| || ||||| || | ||||||| Sbjct 939711 GCCCGCAACATCGGCACAATCCCATTAGAATGGCCGTTTGTACCCGCAATATAA 939764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667862197120