Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 141 7e-29 seq5 87.8 1e-12 >seq1 Length=3473262 Score = 141 bits (156), Expect = 7e-29 Identities = 161/212 (76%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| |||||||| ||||| ||||| || |||||||| || | || |||| | || | Sbjct 2089028 CACCGAGGTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCATCCT 2088969 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || |||||||||||||| ||||| || | || | ||| ||||| ||| Sbjct 2088968 CAAGCTGCTTGCCAGCAAAGATCAAACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCT 2088909 Query 44247 TTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| | | ||| | || ||||| | ||| || || |||| |||||| ||| Sbjct 2088908 GGATCTT-TGCCTTTACGTTGTCAATCGTGTCCGAGGACTCGACTTCCAACGTAATGGTC 2088850 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || ||||||||||| || ||||| Sbjct 2088849 TTCCCCGTCAGCGTCTTCACGAAAATCTGCAT 2088818 Score = 118 bits (130), Expect = 8e-22 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || ||||| || |||||| || |||||||| |||| | || | || || || Sbjct 2088746 AGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAAAGTACGACCATCCTCAAGT 2088687 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||||||||| ||||| | ||||||||| || | || | || ||||| ||| ||| Sbjct 2088686 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCAGGCGGTATGCCCTCCTTGTCCTGAATC 2088627 Query 44252 TTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 ||| |||| | ||| | |||||||| | |||||| ||||||| ||| || ||||| || Sbjct 2088626 TTC-GCTTTGACGTTATCAATGGTGTCAGAGGATTCAACCTCCAACGTGATGGTCTTGCC 2088568 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| |||||||||||||| Sbjct 2088567 GGTCAATGTCTTGACGAAGATTTGCAT 2088541 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||| || ||||||||||| || | || ||| | || ||| Sbjct 2088521 ACGAGGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCC 2088462 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||| ||||| |||||||| | ||| ||||| || | ||| | ||| ||||| ||| Sbjct 2088461 AACTGTTTCCCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 2088402 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | ||||| || | || || ||||| | || || ||||| Sbjct 2088401 ATCTTCGCCTTCACGTTGTCGATGGTATCCGACGACTCAACCTCAAGGGTGATGGTCTTC 2088342 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||| || ||||||||||||||| Sbjct 2088341 CCTGTCAAGGTTTTGACGAAGATTTGCATG 2088312 >seq5 Length=1722318 Score = 87.8 bits (96), Expect = 1e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || ||| |||||||||||||||||| ||| ||| |||| || Sbjct 381466 CACCAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCGTTGAGGGTGCGACCGTCTTC 381407 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| || || ||||||||||| ||||| || Sbjct 381406 AAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTC 381371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989926162636