Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebopus_20portentosus_20[genbank_20GCA_5F000766925.2_202015-02-23] 108 sequences; 30,352,192 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 150 4e-31 >seq1 Length=3473262 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | ||||| || || |||||||| ||||| || || || Sbjct 2088316 CAAATCTTCGTCAAAACCTTGACAGGGAAGACCATCACCCTTGAGGTTGAGTCGTCGGAT 2088375 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || || ||||| ||||||||| Sbjct 2088376 ACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAGCAA 2088435 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || |||||| | || ||||| | ||||| | || || ||| || Sbjct 2088436 CGTCTTATCTTTGCTGGGAAACAGTTGGAGGATGGCCGCACTCTGTCTGACTACAACATC 2088495 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || ||||| || || || || || ||| || | ||| Sbjct 2088496 CAGAAAGAGTCTACCCTTCACCTCGTTCTGCGTCTC 2088531 Score = 136 bits (150), Expect = 1e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || || ||||| | ||||| ||| ||| ||| Sbjct 2088544 CAAATCTTCGTCAAGACATTGACCGGCAAGACCATCACGTTGGAGGTTGAATCCTCTGAC 2088603 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||||||| |||||||||||||| || || || || || |||||||| Sbjct 2088604 ACCATTGATAACGTCAAAGCGAAGATTCAGGACAAGGAGGGCATACCGCCTGACCAGCAG 2088663 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || || || ||||| | ||| | |||| || ||| | Sbjct 2088664 CGTCTCATCTTCGCCGGGAAGCAACTTGAGGATGGTCGTACTTTATCCGACTACAACATT 2088723 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || ||||||| Sbjct 2088724 CAGAAGGAGTCTACTCTTCATCTTG 2088748 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || || || || || | || || || ||| ||| Sbjct 2088821 CAGATTTTCGTGAAGACGCTGACGGGGAAGACCATTACGTTGGAAGTCGAGTCCTCGGAC 2088880 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||| |||||||| || || ||||| || ||||||||| Sbjct 2088881 ACGATTGACAACGTAAAGGCAAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAA 2088940 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| || ||||| | |||||| | || || ||| | Sbjct 2088941 CGTTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGCACTCTTTCTGACTACAACATT 2089000 Query 178104 CAAAAAGAA 178112 || || ||| Sbjct 2089001 CAGAAGGAA 2089009 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| ||||| |||||||||||||||||||| || || Sbjct 8134 CAAATTTTCGTCAAGACCCTCACGGGAAAGACGATCACCCTCGAGGTGGAGTCTTCCGAT 8193 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| || || |||||| || || |||||||| || || Sbjct 8194 ACCATTGATAATGTCAAAGCCAAAATCCAGGACAAGGAGGG 8234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729534336952