Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq10 127 4e-24 seq26 84.2 5e-11 >seq10 Length=1059423 Score = 127 bits (140), Expect = 4e-24 Identities = 138/182 (76%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| | || ||| | |||||||| |||||||| || || || | Sbjct 591213 CTCATCGGCATGAACGCGAAGCTCATGTGTCAGTACATTGAATTCGTGGCTGATCGTCTC 591154 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| | ||||| |||| || |||||||| || | |||||||| | || ||||| Sbjct 591153 CTTGTATCCCTTGGCAACGACAAGGTGTACAATTCGACCAACCCCTTCGACTTCATGGAC 591094 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA-TCAGAG 230624 | || ||||| || || ||||| ||||||||||||||||| ||| |||||| ||| || Sbjct 591093 ATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAAAAGCGCGTCTCTGACTACTCAAAG 591034 Query 230625 GC 230626 || Sbjct 591033 GC 591032 >seq26 Length=527276 Score = 84.2 bits (92), Expect = 5e-11 Identities = 199/299 (67%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 || || |||||||| || ||||| || || || || | || |||| || | ||| Sbjct 179743 CAGGCGTCAACATCAGAGCTGTACGGCAAGGTAGTGGAGACGCCGCAAAGCGAGACGACG 179684 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGAT--TTGTA 61206 || || ||||||||||| || ||||| || || | ||||| || ||||| | || Sbjct 179683 CCCTTCTATCCTCGTAGTCCCTATGGGTGCGCCAAGTTGTACGCATATTGGATAGTGGT- 179625 Query 61207 AAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGA 61266 ||||| || ||| |||| || ||||| | ||| || ||| ||||| ||||||| Sbjct 179624 -CAATTATCGGGAGGCGTACGGGATGTTCGCATGCAATGGGATACTGTTCAACCACGAGA 179566 Query 61267 GTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTT 61326 | || | |||| | || || || || || ||||| | ||| | || |||| | Sbjct 179565 GCCCGAGACGAGGGCGGACTTTCGTCACACGGAAGATTACAAGGGCTGCGGCTGATATCT 179506 Query 61327 TTAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGA 61385 || ||| ||| ||||||| |||||| | || || || ||||||||||| Sbjct 179505 CCTTGGGAAAGCAAAGCTGCCTGTATCTGGGAAACTTGGATGCTCAACGAGATTGGGGA 179447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821750140580