Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq10 159 4e-34 >seq10 Length=1059423 Score = 159 bits (176), Expect = 4e-34 Identities = 386/581 (66%), Gaps = 5/581 (1%) Strand=Plus/Minus Query 16941 GTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGA 17000 |||| || || |||||| || || ||||| ||| || | ||||| ||||| | || Sbjct 593750 GTTTCAGGTGAGTAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGA 593691 Query 17001 TAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCG 17060 | || || || || || || | || || | ||| || ||||| | ||| ||||| | Sbjct 593690 TGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTG 593631 Query 17061 CGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGG 17120 |||||||| |||||||||||||| ||||| |||| || || || | | ||| | | Sbjct 593630 AAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAG 593571 Query 17121 CGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGC 17180 || ||| | ||||| |||||| | |||| || || |||||||| || | Sbjct 593570 CGAACGAAGATCGTTTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATAC 593511 Query 17181 AATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACG 17240 | || ||||| ||||| | |||| | || ||| | | || | ||||| | Sbjct 593510 ATGGTATAGTTTCGATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGG 593451 Query 17241 TATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGT 17300 |||| ||||| | || | || || ||||| || ||||| ||| || ||||||| Sbjct 593450 TATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGT 593391 Query 17301 AAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGT 17360 | || || || ||||| || | ||| ||||| |||| ||||| | || || || | Sbjct 593390 AGAAACAGCGAGCTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACGAGGTTCTCAT 593331 Query 17361 TCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT 17420 | |||||||| ||| ||| ||||| || || | || | ||||| || ||| | Sbjct 593330 TGACGATGCCATCGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCAT 593271 Query 17421 C--CGGTGTAA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGG 17476 | |||| ||| ||| ||||||| | ||||||| || | ||| | |||||| | Sbjct 593270 CGTCGGT-TAATCGAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACG 593212 Query 17477 GTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||||||||| ||| |||| || ||||| | ||| || Sbjct 593211 GTCCAAAAAGAAGCTTGCGCCTGCTTGTACATCTGCCATAT 593171 Score = 138 bits (152), Expect = 1e-27 Identities = 298/446 (67%), Gaps = 0/446 (0%) Strand=Plus/Plus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 ||||| |||| | ||| || ||||| ||| || | |||||||| | ||||| || Sbjct 591360 AGATGGCTAAAAAGCAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGC 591419 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 ||||| || || || | || ||||| || || ||||| ||||| || || | |||| Sbjct 591420 TCGTTGGAGAAAGTAAGACCAGGCATGAGACCACGCTTCTTCAACCAGAAGATAGAGGCG 591479 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 || || || || ||||| ||||||||||| | || || || | | || || ||| | Sbjct 591480 AATGAACCGGAGAAGAAGATACCCTCGACAGCGGCGAAAGCAACGAGACGCTCAGCGAAT 591539 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185 |||| | | || ||||||| | |||||||||| || |||| || ||| Sbjct 591540 GTCGATTGCTGGTCTGAAATCCATCGAAGGGCCCACTCGGCCTTGCGCTTGATACAAGGG 591599 Query 17186 ATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCG 17245 || |||| ||||| | ||| | | || ||| | ||| | || || || ||| Sbjct 591600 ATATTTTCGATGGCATCAAAGAGGTAGTCGCGTTCGGCAAAGTCCTTGATGTAGGTGTCG 591659 Query 17246 ATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAG 17305 || | || || | || ||||| ||||||||||| |||||| || ||||| || Sbjct 591660 ATCAACAGTGAATAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAA 591719 Query 17306 CATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACG 17365 || || || || || | ||| ||||| |||| || || | || |||||||| || Sbjct 591720 CAACGAGCCTCAGCAACTTGCACTTCGTTCGAGAAACGCTCGACGAGGTTTTCGTTGACA 591779 Query 17366 ATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| || |||||||| || || Sbjct 591780 ATGCCATCCGAAGCGGCGAAGAAGGC 591805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544526092880