Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq20 127 2e-24 seq19 125 6e-24 seq8 107 2e-18 >seq20 Length=97954 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || || || || || |||||||| || | |||||| ||||| || ||| Sbjct 71745 TGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCCAGTTGT 71686 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||||||||| || |||||||| ||||||||||||||| || || Sbjct 71685 TTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTG 71626 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | | ||||||||||| ||| | || |||||||| Sbjct 71625 GCCTTTACGTTATCGATGGTGTCTGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 71566 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 71565 AGGGTCTTCACGAAGATCTGCAT 71543 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | ||| || | |||| || ||||| || ||||| ||||| || Sbjct 71997 CCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAA 71938 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| ||||| | || || |||||| ||||||| ||||| || |||||||| Sbjct 71937 AGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 71878 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||||||||| ||| || || || | |||| || || | | ||||||| Sbjct 71877 ATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGACC 71818 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | || |||||||||| || || || || |||||||| Sbjct 71817 TCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 71771 >seq19 Length=654644 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | |||||| | || | || ||||| || ||||| |||||||| Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||||| || || || ||| |||| || |||||||| |||||||| Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||||||| ||| || || || | |||| || |||| ||||||| Sbjct 380873 ATACCCTCCTTGTCTTGAATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGACC 380814 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||| || || || |||||||| || || || ||||||||||| Sbjct 380813 TCAGGGGTGACGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 >seq8 Length=1233415 Score = 107 bits (118), Expect = 2e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || || |||||||| ||||||| ||||| |||||| Sbjct 1004483 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCCTC 1004424 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| || |||||| ||||||| ||||| |||||||| || |||| Sbjct 1004423 GAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGATCGGGGGGAATGC 1004377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829522306872