Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq20 116 4e-21 seq19 105 8e-18 >seq20 Length=97954 Score = 116 bits (128), Expect = 4e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| || | ||| | || |||||| ||||||||||| |||| ||||| || | Sbjct 71986 ACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGACC 71927 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | ||||| |||||||| ||||| ||||| ||||||| || | | |||||| Sbjct 71926 GTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATACCCTCCTT 71867 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | | ||| | | | || ||| || || || |||| |||| Sbjct 71866 GTCC-TGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGACCTCGAGAGTGA 71808 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||| ||||| || | |||||| || ||||| |||||| Sbjct 71807 TGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCATT 71770 >seq19 Length=654644 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | ||||| || |||||| |||||||||||||||| ||||| || | Sbjct 380982 ACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCC 380923 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || ||||| || || ||||||||||||| || | | |||||| Sbjct 380922 GTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATACCCTCCTT 380863 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 || | ||| | || | | ||| | | | ||| || || || || || |||| Sbjct 380862 GT-CTTGAATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGACCTCAGGGGTGA 380804 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || |||||||| || || || ||||| Sbjct 380803 CGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816413478480