Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq93 125 6e-24 seq20 102 7e-17 >seq93 Length=181176 Score = 125 bits (138), Expect = 6e-24 Identities = 280/415 (67%), Gaps = 13/415 (3%) Strand=Plus/Plus Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | || ||||| | |||||| || ||||| ||| || ||||| || ||||| Sbjct 70502 GTGTAAGGCTCGAAGCACTCATTGAAGCCAAGTATTTGACTAGTAGAAGCCGTAGGCATA 70561 Query 22565 GGCGCCAACAGT-AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGA 22623 ||||| | || | |||||||| | ||| || ||||| | ||| || ||| | | | Sbjct 70562 GGCGC-AGCAATGAGCGAGTTCCGCAACCCATGCTTGGCAATCTTCGCCTTCAACGAAGC 70620 Query 22624 CCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCG 22683 ||||||||| ||||| | || || ||| |||| | |||||||||| || | Sbjct 70621 CCAGTCCCAGAGATCCGTAGGGGTGACAC---CCCAGAGGTCGTATTGCAGTCTCCCTTG 70677 Query 22684 ACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT 22743 | || || |||||||||||||| ||||| | || | || | || | ||||||||| Sbjct 70678 AGAGGCAGGACTGCCTTCGTACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCAGCT 70737 Query 22744 CGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC---GGCGGC 22800 ||||| | || | | ||| || ||||| ||||||| || |||||| || ||| || Sbjct 70738 AGCCTCGAGACCGGCATGATAGATGGTCTCAAAGATTTGCTGGTTCAACTCTCTGGCAGC 70797 Query 22801 -GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGC 22859 ||||| ||| | || || | | || ||||||||| || | || || || | Sbjct 70798 GGGCGA----ATCGAAGGGGATGCCGAGAGCCATGAACGCGTCGGCGAGGCCTTGCACAC 70853 Query 22860 CTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATA 22914 | || ||||| || |||| || |||||| |||||||| | |||||| Sbjct 70854 CGATGCCGATGGGACGGTGGCGCATGTTCGACTTACGCGCCTCGGGTACAGGATA 70908 Score = 105 bits (116), Expect = 6e-18 Identities = 189/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 23663 TTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAA 23722 |||| |||||||||||| ||||| ||| ||| || || | ||||||||| ||||| Sbjct 71805 TTCAAAGTGTCGTAGATTCCCTCTATGGAGTCGTCCTTCATGCAGACCAAGAAGCACGAG 71864 Query 23723 GACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTAT 23782 | || | | ||| ||| | || |||||| || || |||||||| |||||| Sbjct 71865 CTAAGCTGTGGGTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCGTGCGTGAAGTAT 71924 Query 23783 CCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCG 23842 | | |||||| || ||||| || |||||| || || || || |||| ||||| ||| Sbjct 71925 CGCTCCGACATGAGGTTGTATGTCTCGATGACGCGGTCGATATCAGCTCCATGTATGCCG 71984 Query 23843 ATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG---CCGTTAATTTTG 23899 | || || ||||| ||||| | ||| || | || ||| |||| ||||| || Sbjct 71985 ACAGCAACACGCATGATCATATGTTGTGGGCGCT---CCGCGACGCGTCCGTTGATACGA 72041 Query 23900 AACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 | || || || |||| | ||||| || ||||| Sbjct 72042 AGGAGGTAAGAGCGTTCAAGGGTTTTGAAACCAAA 72076 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 23353 CATA-AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| ||||| || || ||||| | ||||||||||| || || || || || || | Sbjct 71441 CATACAAAAGGTCAGGGATCCACAATGCGTAGAACAGATCACGAGCACGAGATTCTTCCT 71500 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| |||| || | ||||| || || || || ||||| |||||||| | Sbjct 71501 TCCCGTGGTTCTTCCTCAAGTCGAGGAAGTCGAAGACATCGGCGTGCCATGGCTCGAGAT 71560 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | || || || || || | ||| || || || || || || || || || ||| | Sbjct 71561 AGATAGCGAATGCACCAGGGCGCTTGTTACCTCCTTGGTCAACATATCGAGCTGTGGCAT 71620 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||| ||||| ||||| | ||||| || Sbjct 71621 CATACGCTCGAAGCATTGGCACAATGCCGTTCGA 71654 >seq20 Length=97954 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || ||||| |||| || || | ||| Sbjct 71771 ATGCAGATCTTCGTTAAGACGTTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCC 71830 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | || || || || ||||||||| || | || |||||||| Sbjct 71831 GATACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 71890 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| || ||||| ||| | ||| | || || || Sbjct 71891 CAGCGCCTCATCTTCGCTGGCAAGCAATTGGAGGACGGTCGCACTCTTTCTGACTACAAT 71950 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || ||||| || ||||| || Sbjct 71951 ATTCAGAAGGAGTCGACGCTCCATCTTGT 71979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765475034720