Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq10 163 4e-35 >seq10 Length=1059423 Score = 163 bits (180), Expect = 4e-35 Identities = 381/569 (67%), Gaps = 8/569 (1%) Strand=Plus/Plus Query 33571 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAG 33630 |||| | || || ||||| ||| ||||| |||||||| | ||| || | ||||| | Sbjct 591367 TAAAAAGCAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGCTCGTTGG 591426 Query 33631 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33690 | || || || || ||||| || |||||||| || | ||| || || || |||||||| | Sbjct 591427 AGAAAGTAAGACCAGGCATGAGACCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAAC 591486 Query 33691 CGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGC 33748 |||| |||||||| || || || || || || |||| || | ||| | || | Sbjct 591487 CGGAGAAGAAGATACCCTCGACAGCGGCGAAAGCAACGAGACGCTCAGCGAATGTCGATT 591546 Query 33749 GCTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33807 |||| || | |||| | ||||| |||||||| || | |||||| || ||| Sbjct 591547 GCTGGTCTGAAATCCATCGAAGGGCCCACTCGGCCTTGCGCTTGATACAAGGGATATTTT 591606 Query 33808 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33867 | ||||||| |||||| |||| ||| | || || | || || |||||||| | Sbjct 591607 CGATGGCATCAAAGAGGTAGTCGCGTTCGGCAAAGTCCTTGATGTAGGTGTCGATCAACA 591666 Query 33868 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33927 | ||| | || || || ||||| || || ||||| || ||||||||||| | || Sbjct 591667 GTGAATAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAACAACGAG 591726 Query 33928 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987 |||| | || |||||||| | | || || || | | ||||| || || || |||| Sbjct 591727 CCTCAGCAACTTGCACTTCGTTCGAGAAACGCTCGACGAGGTTTTCGTTGACAATGCCAT 591786 Query 33988 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGT---GTT 34043 | || || || || || | || || || || | ||| | | || | | Sbjct 591787 CCGAAGCGGCGAAGAAGGCGAGGACGTGAGAGATGAAGTGACGCTCGCCATCGTTCAGCT 591846 Query 34044 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 34103 |||| |||| |||| |||||||||||| | |||| || || | ||||| || || Sbjct 591847 TGTTT-GTCCAGTCATGGATATCTTTAGAAAGGTCCATCTCCTCAGCAGTCCAGAAGGAA 591905 Query 34104 GCCTCTGCCTTTTTATACATATTCCAGAT 34132 ||||| || || || ||||| | ||| || Sbjct 591906 GCCTCGGCTTTCTTGTACATTTGCCATAT 591934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816293128480