Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq10 129 8e-25 >seq10 Length=1059423 Score = 129 bits (142), Expect = 8e-25 Identities = 371/568 (65%), Gaps = 6/568 (1%) Strand=Plus/Minus Query 36147 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 36206 |||||| | || ||||| ||| ||| | ||||| ||||||| || | || |||| Sbjct 593738 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 593679 Query 36207 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 36266 | || || || || || | || || ||||| || ||||| ||||| || || || |||| Sbjct 593678 AGAAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATC 593619 Query 36267 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC 36326 |||||||||| || || ||||| || || || |||| || | | | | | | Sbjct 593618 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCGAACGAAGATC 593559 Query 36327 ---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383 |||| | |||||| ||||||| || ||||| | || | ||| || || || | Sbjct 593558 GTTTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTTT 593499 Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 | || |||| || || | | |||||| ||||| | ||| |||||||| | | Sbjct 593498 CGATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 593439 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 | ||| | |||||||| || ||||| || ||||| |||||||||||||| | || Sbjct 593438 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGAG 593379 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563 | || | | || ||||| | | || ||||| | | || ||||| || || || | Sbjct 593378 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACGAGGTTCTCATTGACGATGCCAT 593319 Query 36564 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-ATTTTTCGTTTGGTGTTA 36620 | || || || || || | || | | | | ||| || |||| | | | Sbjct 593318 CGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 593259 Query 36621 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 36680 | |||||| || | ||||||||| | ||| | ||||| || |||||||| || | Sbjct 593258 GAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 593199 Query 36681 CCTCTGCCTTTTTATACATATTCCAGAT 36708 | | |||| || ||||| | ||| || Sbjct 593198 CTTGCGCCTGCTTGTACATCTGCCATAT 593171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171434291440