Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 150 3e-31 >seq10 Length=1059423 Score = 150 bits (166), Expect = 3e-31 Identities = 377/568 (66%), Gaps = 6/568 (1%) Strand=Plus/Minus Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008 |||||| | || ||||| ||| ||||| ||||| ||||||| || || || |||| Sbjct 593738 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 593679 Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACC 50068 | || || || || || | || || ||||| || ||||| ||||| || || || || | Sbjct 593678 AGAAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATC 593619 Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGC 50126 |||||||||| || || ||||| || || || ||||| || | | | | | | Sbjct 593618 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCGAACGAAGATC 593559 Query 50127 G-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 | |||| | |||||| ||||||| || ||||| | || | ||| || || |||| Sbjct 593558 GTTTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTTT 593499 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | ||||||| || || | | |||||| ||||| | ||| ||||| || | | Sbjct 593498 CGATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 593439 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | ||| | |||||||| || ||||| || || || |||||||||||||| | || Sbjct 593438 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGAG 593379 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 | || | | || ||||| | | || |||||| | | || ||||| || || || | Sbjct 593378 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACGAGGTTCTCATTGACGATGCCAT 593319 Query 50366 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-GTTTTTCGTTGGGTGTTA 50422 | || || || || || | || | | | | ||| ||| |||| || | | Sbjct 593318 CGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 593259 Query 50423 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 50482 | |||||| || | ||||||||| | ||| | ||||| || |||||||| || | Sbjct 593258 GAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 593199 Query 50483 CCTCTGCCTTTTTATACATATTCCAGAT 50510 | | |||| || ||||| | ||| || Sbjct 593198 CTTGCGCCTGCTTGTACATCTGCCATAT 593171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267309592240