Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10 102 8e-17 >seq10 Length=1059423 Score = 102 bits (112), Expect = 8e-17 Identities = 237/352 (67%), Gaps = 8/352 (2%) Strand=Plus/Minus Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 |||||||||||||| || || || || || || || | || || | ||||| || || Sbjct 593707 GCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCGCGCTT 593648 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 || | ||| ||||||| ||| || || || ||||||||||| ||||| || ||||| || Sbjct 593647 CTTGAGCCAGAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAA 593588 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || | | ||| | | ||||| | | ||||| ||||||| ||||||||| Sbjct 593587 TGCAACGAGGCGTGCAGCGAACGAAGATCGTTTGTCTTCTATCCATCGAAGAGCCCATTC 593528 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATT--CCTTCTCT 14129 | |||| || ||| | || ||||| || |||| |||| | | | ||| | Sbjct 593527 TGCCTTTTGCTTGATACATGGTATAGTTTCGATGGCATCGAATAGGTGCTGGCGTTC-AT 593469 Query 14130 TTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189 | | ||| || || |||||||| || | ||| | || || ||||| |||||| Sbjct 593468 TCGGCTCTT-TGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCC 593410 Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC--CGACCATTGTACTTC 14239 || ||| || || || || || || | |||||| |||| ||| ||||| Sbjct 593409 ATCATTATTTGGAATCCGTAGAAACAGCGAGCTTCTGCGAC--TTGGACTTC 593360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727004564400