Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq10 179 5e-40 >seq10 Length=1059423 Score = 179 bits (198), Expect = 5e-40 Identities = 376/550 (68%), Gaps = 14/550 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||| || || || |||||||| ||||||||| | ||||| Sbjct 593171 ATATGGCAGATGTACAAGCAGGCGCAAGCTTCTTTTTGGACCGTCGAAGAGATTGATCTC 593230 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || || | || ||| | ||| || || || ||| ||| || || || Sbjct 593231 TCTAAAGATTGGATGGACTGGAATCTTCGATTAACCGACGATGAACGATTCTTCATCTCC 593290 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 | ||| | |||||||| || | |||||||| |||||||| || || || ||||| ||| Sbjct 593291 CGCATCCTCGCCTTCTTCGCGGCGTCCGATGGCATCGTCAATGAGAACCTCGTTGA-ACG 593349 Query 125198 ATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||||| ||| | | ||| || |||| | ||| || || |||||||||||||| || Sbjct 593350 CTTCTC--AAGCGAAGTCCAAGTCGCAGAAGC-TCGCTGTTTCTACGGATTCCAAATAAT 593406 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC 125314 ||| || || | || ||||| | || |||| || ||||| | || || || || Sbjct 593407 GATGGAAAATATACATTCGGAGACCTATTCTATGCTCATTGATACCTATATCAAAGAGCC 593466 Query 125315 GCA---ACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 | | ||| | ||| || || | || ||||| || | || | ||| |||| Sbjct 593467 GAATGAACGCCAGCAC---CTATTCGATGCCATCGAAACTATACCATGTATCAAGCAAAA 593523 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 ||| |||||| |||| ||||| || ||| | ||||||| ||| | | || || Sbjct 593524 GGCAGAATGGGCTCTTCGATGGATAGAAGACAAACGATCTTCGTTCGCTGCACGCCTCGT 593583 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 |||||||| |||||||||||||| |||||||| || || || | || || ||||| Sbjct 593584 TGCATTCGCTGCCGTAGAGGGCATATTCTTTTCTGGATCGTTCGCTTCAATATTCTGGCT 593643 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||||||||||||| | | || || || || | || ||| | || | | |||| || Sbjct 593644 CAAGAAGCGCGGATTACTACCTGGCCTTACCTTCTCCAATGAGCTCATCTGTAGAGATGA 593703 Query 125552 GGGCCTACAC 125561 |||| | ||| Sbjct 593704 GGGCATGCAC 593713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057662302160