Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq20 131 4e-25 seq10 111 4e-19 seq19 102 2e-16 >seq20 Length=97954 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || ||||||||||| |||||||| ||||| | |||||| || Sbjct 71979 ACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGACCGTCCTCC 71920 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||| || ||||| || || || | |||||| || ||||| || || || || |||||| Sbjct 71919 AATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGA 71860 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || || || || || | |||||| | || ||||| || || || ||||| Sbjct 71859 ATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGACCTCGAGAGTGATGGTCTTG 71800 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | || || || || ||||||||| Sbjct 71799 CCGGTCAACGTCTTAACGAAGATCTGCATT 71770 >seq10 Length=1059423 Score = 111 bits (122), Expect = 4e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 |||||||| |||||||| || ||||| ||||| || || || || ||| ||||||| ||| Sbjct 591523 GTTGCTTTCGCCGCTGTCGAGGGTATCTTCTTCTCCGGTTCATTCGCCTCTATCTTCTGG 591464 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 |||||||| | || || ||||| || | |||||||| ||||| | || || | ||| Sbjct 591463 TTGAAGAAGCGTGGTCTCATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGAC 591404 Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283 || || | ||| |||||||||||| Sbjct 591403 GAGGGCATGCACACCGACTTCGCTTG 591378 >seq19 Length=654644 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || ||||||||||| || ||||| ||||| | ||||| || Sbjct 380975 ACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAAAGAGTGCGGCCGTCCTCG 380916 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || || || || || || | ||| || || ||||| || || || || || ||| Sbjct 380915 AGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGA 380856 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || || || || || | ||||| | || ||||| | || | ||||| Sbjct 380855 ATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGACCTCAGGGGTGACGGTCTTC 380796 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || |||||||| Sbjct 380795 CCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395951119528