Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq72 86.0 3e-12 seq24 86.0 3e-12 seq7 84.2 1e-11 >seq72 Length=338540 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 141128 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 141069 Query 11528 CCGTCG 11533 ||| || Sbjct 141068 CCGACG 141063 >seq24 Length=573466 Score = 86.0 bits (94), Expect = 3e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||| | | |||||||||| |||||||||||||||||||||||||||| |||| Sbjct 172916 TTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 172975 Query 11515 CTGAGCTAATGGGCCGTCG 11533 |||||||| | ||||| || Sbjct 172976 CTGAGCTAGTCGGCCGACG 172994 >seq7 Length=1305633 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||| | | |||||||||| |||||||||||||||||||||||||||| |||| Sbjct 300018 TTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 299959 Query 11515 CTGAGCTAATGGGCC 11529 |||||||| | |||| Sbjct 299958 CTGAGCTAGTCGGCC 299944 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 334262 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 334203 Query 11528 CCG 11530 ||| Sbjct 334202 CCG 334200 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 336828 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 336769 Query 11528 CCG 11530 ||| Sbjct 336768 CCG 336766 Lambda K H 0.640 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490670970616