Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq27 109 9e-20 seq39 95.1 2e-15 seq8 93.3 7e-15 >seq27 Length=508674 Score = 109 bits (120), Expect = 9e-20 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| |||||||||||||| ||||| ||||| ||||| || || |||||| |||| Sbjct 105946 AGGTATCACTAAGCCAGCTATCCGCCGTCTTGCTCGCCGTGGAGGTGTGAAGCGTATCTC 105887 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || ||| |||| || |||| |||| ||| | || || ||||| ||| |||||| | Sbjct 105886 CGGCTTGATCTACGAGGAGACCCGTGGTGTCCTCAAAATTTTCCTTGAGAACGTTATTCG 105827 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| | || ||| || || |||||||| || Sbjct 105826 TGACTCGGTCACCTACACTGAACACGCTAAGCG 105794 >seq39 Length=254528 Score = 95.1 bits (104), Expect = 2e-15 Identities = 107/142 (75%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 || ||||||||||| ||||||||||| || ||||||||| | ||||| ||| |||| ||| Sbjct 204253 GCCATCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTGGCTTGATCTACGAA 204194 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| ||||| ||| | ||||| ||| | ||| || || | ||| | || || Sbjct 204193 GAGACTCGTGGTGTCCTCAAGATTTTCTTGGAGAATGTCATTCGTGACTCCGTCACTTAC 204134 Query 16607 ACCGAGCACGCTAAAC-GTAAG 16627 || |||||||| || | ||||| Sbjct 204133 ACTGAGCACGCCAAGCGGTAAG 204112 >seq8 Length=1233415 Score = 93.3 bits (102), Expect = 7e-15 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || ||||| || || |||||||| ||||| ||||| || || |||||| | || Sbjct 340827 AGGTATTACGAAGCCCGCCATTCGTCGTCTTGCTCGCCGTGGAGGTGTGAAGCGTATTTC 340886 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 ||| | |||| ||||||| ||||| |||| | ||||||||||| ||| ||| Sbjct 340887 TGGCCTTATCTACGAAGAGACTCGTGGTGTTCTTAAGATCTTCCTTGAGAACGT 340940 Score = 89.7 bits (98), Expect = 8e-14 Identities = 89/114 (78%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || ||||| || || |||||||| ||||| ||||| || || |||||| | || Sbjct 375930 AGGTATTACGAAGCC-GCCATTCGTCGTCTTGCTCGCCGTGGAGGTGTGAAGCGTATTTC 375872 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 ||| | |||| ||||||| ||||| |||| | ||||||||||| ||| ||| Sbjct 375871 TGGCCTTATCTACGAAGAGACTCGTGGTGTTCTTAAGATCTTCCTTGAGAACGT 375818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075048225038