Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 156 5e-33 >seq10 Length=1059423 Score = 156 bits (172), Expect = 5e-33 Identities = 378/568 (67%), Gaps = 6/568 (1%) Strand=Plus/Minus Query 33293 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 33352 |||||| | || ||||| ||| ||||| ||||| ||||||| || || || |||| Sbjct 593738 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 593679 Query 33353 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33412 | || || || || || | || || ||||| || ||||| ||||| |||||||| |||| Sbjct 593678 AGAAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATC 593619 Query 33413 CAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGC 33470 |||||||||| || || ||||| ||||| || |||| || | | | | | | Sbjct 593618 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCGAACGAAGATC 593559 Query 33471 G-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33529 | |||| | |||||| ||||||| || ||||| | || | ||| || || |||| Sbjct 593558 GTTTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTTT 593499 Query 33530 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33589 | ||||||| || || | | |||||| ||||| | ||| ||||| || | | Sbjct 593498 CGATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 593439 Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649 | ||| | |||||||| || ||||| || || || |||||||||||||| | || Sbjct 593438 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGAG 593379 Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGT 33709 | || | | || ||||| | | || ||||| | | || ||||| || || || | Sbjct 593378 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACGAGGTTCTCATTGACGATGCCAT 593319 Query 33710 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTA 33766 | || || || || || | || | | | | ||| || ||||| | | | Sbjct 593318 CGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 593259 Query 33767 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 33826 | |||||| || | ||||||||| | ||| | ||||| || |||||||| || | Sbjct 593258 GAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 593199 Query 33827 CCTCTGCCTTTTTATACATGTTCCAGAT 33854 | | |||| || ||||| | ||| || Sbjct 593198 CTTGCGCCTGCTTGTACATCTGCCATAT 593171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945907384560