Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq10 109 1e-18 seq93 100 7e-16 >seq10 Length=1059423 Score = 109 bits (120), Expect = 1e-18 Identities = 249/372 (67%), Gaps = 11/372 (3%) Strand=Plus/Plus Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| | ||| | |||| || | |||||||| || | ||||| ||||| |||||| | Sbjct 593360 GAAGTCCAAGTCGCAGAAGCTCGCTGTTTCTACGGATTCCAAATAATGATGGAAAATATA 593419 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC-AACG 22397 || |||| || ||||||||| | || | | | || | | | || |||| |||| Sbjct 593420 CATTCGGAGACCTATTCTATGCT----CATTGATACCTATATCAAAGAGCCGAATGAACG 593475 Query 22398 AAA---CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGC 22454 | | ||||| || || || || | || || ||| | |||||||| ||||| Sbjct 593476 CCAGCACCTATTCGATGCCATCGAAACTATACCATGTATCAAGCAAAAGGCAGAATGGGC 593535 Query 22455 GCTGAAATGGATGAACAATGAACG---TTCATTCGCGGAACGTCTTATTGCATTTGCTGT 22511 || |||||| | | |||| ||| ||||| | ||| || ||||||| |||| Sbjct 593536 TCTTCGATGGATAGAAGACAAACGATCTTCGTTCGCTGCACGCCTCGTTGCATTCGCTGC 593595 Query 22512 GGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGC 22571 || || ||||| |||||||||||| | || | |||| || ||||| || || || | Sbjct 593596 CGTAGAGGGCATATTCTTTTCTGGATCGTTCGCTTCAATATTCTGGCTCAAGAAGCGCGG 593655 Query 22572 AATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATAC 22631 | | | || || || || || || |||||| | || | |||||||||| | || || Sbjct 593656 ATTACTACCTGGCCTTACCTTCTCCAATGAGCTCATCTGTAGAGATGAGGGCATGCACAC 593715 Query 22632 CGATTTTGCGTG 22643 ||| || || || Sbjct 593716 CGAATTCGCTTG 593727 >seq93 Length=181176 Score = 100 bits (110), Expect = 7e-16 Identities = 157/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || |||||||| || | || || |||||||| | || ||| || || | || || Sbjct 71660 GGTTACTCGAACGGCATTGTGCCAATGCTTCGAGCGTATGATGCCACAGCTCGATATGTT 71601 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||| || || |||||| || || || ||||| ||||||||||| || ||| Sbjct 71600 GACCAAGGAGGTAACAAGCGCCCTGGTGCATTCGCTATCTATCTCGAGCCATGGCACGCC 71541 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAAAAGAGGAATTGCGTGCACG 363932 ||| | || || || || || | |||| ||| ||||||| || |||| ||||| || Sbjct 71540 GATGTCTTCGACTTCCTCGACTTGAGGAAGAACCACGGGAAG-GAAGAATCTCGTGCTCG 71482 Query 363933 TGATCTGTTCTATGCACTTTGGGTTTCTGACCATTT-TATG 363972 |||||||||||| ||| | ||| | |||||| ||| |||| Sbjct 71481 TGATCTGTTCTACGCATTGTGGATCCCTGACCTTTTGTATG 71441 Score = 96.9 bits (106), Expect = 9e-15 Identities = 196/289 (68%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 363415 TCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGT 363474 || ||||| ||||||||| || | | || ||||| || |||||| | |||||| Sbjct 72052 TCTTACCTCCTTCGTATCAACGGACGCGTCGCGGAGCGCCCACAACATATGATCATGCGT 71993 Query 363475 GTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG--ATTGAAACATATAAGCTTC 363532 |||||| | || || ||| | | ||| | || ||||| || || ||||| || || Sbjct 71992 GTTGCTGTCGGCATACATGGAGCTGATATCGA--CCGCGTCATCGAGACATACAACCTCA 71935 Query 363533 TAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC 363592 | | || ||||||||||| | || || ||| ||||||||| |||| | | Sbjct 71934 TGTCGGAGCGATACTTCACGCACGCTTCTCCTACTCTGTTCAATGCTGGTACTCCCCACC 71875 Query 363593 CACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTG 363652 ||||| | || ||||| | | ||||||||||| ||||| ||||| |||| | Sbjct 71874 CACAGCTTAGCTCGTGCTTCTTGGTCTGCATGAAGGACGACTCCATAGAGGGAATCTACG 71815 Query 363653 ACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG 363701 |||| | |||| ||||||| | ||| ||| | || || ||||| || Sbjct 71814 ACACTTTGAAGAGTTGTGCTATGATTAGCAAAACAGCTGGTGGAATCGG 71766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350827929812