Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq20 109 4e-19 seq19 98.7 8e-16 >seq20 Length=97954 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 16707 ACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGG 16766 |||| || || || | || || | ||| ||||| |||||||| || || |||||||| | Sbjct 71999 ACCCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAG 71940 Query 16767 CCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAG 16826 | || ||||||||||||| ||||| || | || || ||||||||||| || Sbjct 71939 AAAGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAG 71880 Query 16827 GCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | | ||||| ||||| ||| | | |||||| | | | | ||| ||| || ||| Sbjct 71879 GGATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGA 71820 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||| || ||||||| ||| || || || ||||||||| Sbjct 71819 CCTCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCATT 71770 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| ||||| || ||||||||||| | | || | ||||| Sbjct 71754 AGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 71695 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| |||||| || || | || || ||||||||||| ||| | |||||| ||||| Sbjct 71694 TCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCT 71635 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | ||||| || ||| || | |||||||| Sbjct 71634 TGGATCTTGGC--CTTTACGTTATCGATGGTGTCTGAGGACTCGACCTCGAGGGTGATGG 71577 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || || || || |||||||| Sbjct 71576 TCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 >seq19 Length=654644 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 16707 ACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGG 16766 |||| || || || | || || | ||||||||| |||||||| || || ||||| || | Sbjct 380995 ACCCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAG 380936 Query 16767 CCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAG 16826 | || | ||||||| | ||| ||||| || | ||||| ||||| ||||| || Sbjct 380935 AAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAG 380876 Query 16827 GCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | | ||||| ||||| ||| | | |||||| | | | | || || | ||| Sbjct 380875 GGATACCCTCCTTGTCTTGAATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGA 380816 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||| || ||||||||||| ||||| ||||||||||| Sbjct 380815 CCTCAGGGGTGACGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087180456340