Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq106 140 2e-28 seq8 107 1e-18 seq64 102 5e-17 seq20 102 5e-17 seq44 87.8 1e-12 seq19 86.0 4e-12 >seq106 Length=109336 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 89428 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 89487 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 89488 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 89522 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 91407 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 91466 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 91467 GCCAATATTTAGCTTTA 91483 >seq8 Length=1233415 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 11810 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 11869 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 11870 GCCAATATTTAGCTTTA 11886 Score = 95.1 bits (104), Expect = 8e-15 Identities = 69/79 (87%), Gaps = 6/79 (8%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 20384 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 20443 Query 25957 TAATCCTTTCATGCGCGTC 25975 |||||| || |||| ||| Sbjct 20444 TAATCCATT-GTGCGGGTC 20461 Score = 86.0 bits (94), Expect = 4e-12 Identities = 68/79 (86%), Gaps = 7/79 (9%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||| |||||||||||||||||||||| || |||||||| Sbjct 2653 AAGCCCGTTCCCTTGGCTGTG-TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2711 Query 25957 TAATCCTTTCATGCGCGTC 25975 |||||| || |||| ||| Sbjct 2712 TAATCCATT-GTGCGGGTC 2729 >seq64 Length=403817 Score = 102 bits (112), Expect = 5e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 6183 CGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTG--CGCCAAGGTCG 6240 ||| |||| | ||| |||||||||||| |||| | | |||| | ||||| ||| Sbjct 122350 CGTGATGTCGACGACAAATTCTACCGCTACCGCATGC--CCCTTCTGACCACCAAGATCG 122407 Query 6241 AGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGC 6300 |||| || ||||| || || || || |||||| ||||||| |||| ||||| |||| Sbjct 122408 AGGGCAAAGGAAATGGCATCAAGACGGTCATTCCCAACATGTCTGATGTCGCGCGAGCGC 122467 Query 6301 TCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGC 6360 || | || || | || || | || || | || || |||||||| || || || ||| Sbjct 122468 TCAGCCGTCCCCCGACGTATACAACCAAGTTCTTTGGCTGCGAACTCGGAGCGCAAACGT 122527 Query 6361 AGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGG 6397 |||||| | || || || |||| |||||| ||||| Sbjct 122528 CGTTTGACGAGAAGAATGACCGCTACATCGTCAACGG 122564 >seq20 Length=97954 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 |||||| || | ||| || || |||||| ||||||||||| ||||| | | || | Sbjct 71986 ACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGACC 71927 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 ||| || ||||| || || || || || ||||| ||||| |||| |||| || || || Sbjct 71926 GTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATACCCTCCTT 71867 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 |||| ||| || |||||| || | || |||||| || || || | || || Sbjct 71866 GTCCTGAATCTTCGCCTTCACGTTGTCGATAGTATCGGAGGACTCGACCTCGAGAGTGAT 71807 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || || ||||| |||||||| Sbjct 71806 GGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 71771 >seq44 Length=415597 Score = 87.8 bits (96), Expect = 1e-12 Identities = 196/293 (67%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 ||||||||||| |||||| | || |||| | ||||| || ||||| || || Sbjct 33905 TTCTACCGCTATCGAATGCCCCTTCTCACTACCAAAATTGAGGGGAAAGGAAATGGCATC 33846 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || || || | || ||| |||| |||||| || ||| | || ||| | || ||| Sbjct 33845 AAGACAGTGGTCCCGAATATGTCTGACGTCGCTCGCGCTCTCAGCCGACCTCCGACTTAC 33786 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | || || | ||||||||||||||||| ||||| || || || | || || || Sbjct 33785 ACTACTAAGTTCTTCGGGTGCGAACTTGGAGCTCAAACCTCCTTCGACGAAAAGAATGAT 33726 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAA---GCTGCAGGACTTACTTGACGGC 6437 |||| ||||||||| || | || || || || || | || | ||||| | Sbjct 33725 CGCTACATCGTTAATGGTGCCCACGAC---GCAAATCGCCTCCGTGAACTGCTTGATGTT 33669 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 || || |||||| || || || || |||| | ||||| ||||||||||| Sbjct 33668 TTCATCGACAAGTTCGTTCTCTGCAAGGCATGCAAGAACCCTGAGACCGAGCT 33616 >seq19 Length=654644 Score = 86.0 bits (94), Expect = 4e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||||||||| | ||| || || |||||| ||||||||||||||||| Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || |||| || | ||| || ||||| || || ||||| || || |||| ||| Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC 38257 | || || ||||| ||| || |||||| || | || ||||| Sbjct 380873 ATACCCTCCTTGTCTTGAATCTTCGCCTTCACGTTGTCGATCGTATC 380827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946522359946