Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq10 129 7e-25 >seq10 Length=1059423 Score = 129 bits (142), Expect = 7e-25 Identities = 372/568 (65%), Gaps = 6/568 (1%) Strand=Plus/Minus Query 32650 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 32709 |||||| | || ||||| ||| ||| | ||||| ||||||| || | || |||| Sbjct 593738 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 593679 Query 32710 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 32769 | || || || || || | || || ||||| || ||||| ||||| || || || |||| Sbjct 593678 AGAAGGTAAGGCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATC 593619 Query 32770 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGC 32827 |||||||||| || || ||||| || || || |||| || | | | | | | Sbjct 593618 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCGAACGAAGATC 593559 Query 32828 G-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 | |||| | |||||| ||||||| || ||||| | || | ||| || || || | Sbjct 593558 GTTTGTCTTCTATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTTT 593499 Query 32887 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 32946 | || |||| || || | | |||||| ||||| | ||| |||||||| | | Sbjct 593498 CGATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCA 593439 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAG 33006 | ||| | |||||||| || ||||| || ||||| ||||||||||| || | || Sbjct 593438 TAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGAG 593379 Query 33007 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 | || | | || ||||| | | || ||||| | | || ||||| || || || | Sbjct 593378 CTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACGAGGTTCTCATTGACGATGCCAT 593319 Query 33067 CACTGGCTGCAAAAAACGCCA--ATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTA 33123 | || || || || || | || | | | | ||| || ||||| | | | Sbjct 593318 CGGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATC 593259 Query 33124 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 33183 | |||||| || | ||||||||| | ||| | ||||| || |||||||| || | Sbjct 593258 GAAGATTCCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAG 593199 Query 33184 CCTCTGCCTTTTTATACATATTCCAGAT 33211 | | |||| || ||||| | ||| || Sbjct 593198 CTTGCGCCTGCTTGTACATCTGCCATAT 593171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630685213600