Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 205 1e-47 >seq10 Length=1059423 Score = 205 bits (226), Expect = 1e-47 Identities = 386/561 (69%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || || ||||| || | || || |||| | || | ||||||| ||| || | Sbjct 593728 GCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAG 593669 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || |||| | ||| || ||||||||||| ||||||||||| || |||||||| || Sbjct 593668 GCCAGGTAGTAATCCGCGCTTCTTGAGCCAGAATATTGAAGCGAACGATCCAGAAAAGAA 593609 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGC 93269 ||| || || ||||| || ||||| || | ||| | || || | || || | Sbjct 593608 TATGCCCTCTACGGCAGCGAATGCAACGAGGCGTGCAGCGAACGAAGATCGTTTGTCTTC 593549 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 | |||||| | |||||| || || |||| ||| ||||| |||| |||||||| || | Sbjct 593548 T-ATCCATCGAAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATAGTTTCGATGGCAT 593490 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 ||||||| | || || | || ||| || || ||||| || | || |||||| Sbjct 593489 CGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGG 593430 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || ||||| | ||| ||||| |||||||||||||||||||| | |||||| | || Sbjct 593429 TCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGAGCTTCTGCGA 593370 Query 93450 TCTGCACTT--CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 || |||| |||||| || | || ||||| || |||||||| || |||||||| || Sbjct 593369 CTTGGACTTCGCTTGAG--AAGCGTTCAACGAGGTTCTCATTGACGATGCCATCGGACGC 593312 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAA--GCTTATC 93564 || || || || | || | || || | ||||| || |||| | || Sbjct 593311 CGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAATCGAAGATT 593252 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| || |||||| || ||||| | |||||||| |||||||| || |||| || Sbjct 593251 CCAGTCCATCCAATCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAGCTTGCGC 593192 Query 93625 TTTTTTGTACATATCCCATAT 93645 | |||||||| | |||||| Sbjct 593191 CTGCTTGTACATCTGCCATAT 593171 Score = 192 bits (212), Expect = 7e-44 Identities = 384/564 (68%), Gaps = 15/564 (3%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | || ||||| || || | ||| ||| ||| || | Sbjct 591377 GCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAG 591436 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||| | ||| || || || || || ||| || || || Sbjct 591437 ACCAGGCATGAGACCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCGGAGAAGAA 591496 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| || || || || || || || | ||| || || || | | ||| ||| Sbjct 591497 GATACCCTCGACAGCGGCGAAAGCAACGAGACGCTCAGCGAATGTCG----ATTGCTGGT 591552 Query 93269 CTGA--TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 |||| ||||| | ||||| ||||| || ||| |||||||| | ||||||| | Sbjct 591553 CTGAAATCCATCGAAGGGCCCACTCGGCCTTGCGCTTGATACAAGGGATATTTTCGATGG 591612 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 | | ||| ||||| || || ||| | | || ||||| || ||||| ||||| |||| Sbjct 591613 CATCAAAGAGGTAGTCGCGTTCGGCAAAGTCCTTGATGTAGGTGTCGATCAACAGTGAAT 591672 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | | ||||| |||| |||||||| || ||||| ||||||||||| | ||| || | Sbjct 591673 AGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAACAACGAGCCTCAG 591732 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 | |||||||| | || || | ||| ||||| ||||| ||||| || ||||| || | Sbjct 591733 CAACTTGCACTTCGTTCGAGAAACGCTCGACGAGGTTTTCGTTGACAATGCCATCCGAAG 591792 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTAT--- 93563 | || || || || | | || || || || ||| |||| || ||||| | Sbjct 591793 CGGCGAAGAAGGCGAGGACGTGAGAGATGAAGTGACGCTCGCCATCGTTCAGCTTGTTTG 591852 Query 93564 CCCAATC--GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTC 93621 ||| || |||| |||||| ||||| || | || || ||||||| || || || || Sbjct 591853 TCCAGTCATGGAT--ATCTTTAGAAAGGTCCATCTCCTCAGCAGTCCAGAAGGAAGCCTC 591910 Query 93622 TGCTTTTTTGTACATATCCCATAT 93645 ||||| |||||||| | |||||| Sbjct 591911 GGCTTTCTTGTACATTTGCCATAT 591934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859644513840