Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20eryngii_20[genbank_20GCA_5F001717165.1_202016-08-30] 166 sequences; 43,779,707 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq20 170 4e-37 seq26 156 8e-33 seq19 149 1e-30 seq3 89.7 9e-13 >seq20 Length=97954 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| ||||| || || | || | || || ||||| || || |||||||| || || | Sbjct 71771 TTCCACCGCGGAGACGGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 71712 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || || || | || || |||||||| ||||| | ||||||||||| | Sbjct 71711 AAAGAGTGCGGCCGTCCTCCAGTTGTTTACCGGCGAAGATGAGACGCTGTTGGTCGGGAG 71652 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| || || | Sbjct 71651 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTATCGATGGTGTCTGAGGACTCGA 71592 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||||||||| || || ||||||||||| ||||| |||||||| Sbjct 71591 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 71543 Score = 143 bits (158), Expect = 5e-29 Identities = 177/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 68222 GTGATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGAT 68281 |||||| ||| || ||||| || ||||| || | || ||||| ||||| || || || Sbjct 72008 GTGATTATAAC--CCGCCGCGGAGACGCAAGACAAGATGGAGCGTCGACTCCTTCTGAAT 71951 Query 68282 GTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTG 68341 || || || || || || | || || || || ||||| || ||||| ||||| | || Sbjct 71950 ATTGTAGTCAGAAAGAGTGCGACCGTCCTCCAATTGCTTGCCAGCGAAGATGAGGCGCTG 71891 Query 68342 TTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||||||| || || || |||||||| |||||||| ||||| ||| ||||| || || Sbjct 71890 TTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATAGTATC 71831 Query 68402 TGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || || | |||||||| || || || | ||||| ||||| |||||||| Sbjct 71830 GGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 71771 Query 68462 T 68462 | Sbjct 71770 T 71770 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||||||| |||||||| || | || || || || Sbjct 71355 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGACGACTCCACCTCG 71296 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || ||||| ||||||||||||||||| || ||||| Sbjct 71295 AGGGTGATAGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 71252 Score = 89.7 bits (98), Expect = 9e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | || ||||| ||||| || |||||||| || || || Sbjct 71541 CCACCGCGAAGACGAAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCTGAA 71482 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||||||| ||||| ||||| | ||||||||||| ||| Sbjct 71481 AGAGTACGTCCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGA 71422 Query 68355 ATGC 68358 |||| Sbjct 71421 ATGC 71418 >seq26 Length=527276 Score = 156 bits (172), Expect = 8e-33 Identities = 349/517 (68%), Gaps = 14/517 (3%) Strand=Plus/Plus Query 268286 TGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCC---- 268341 || |||||||| || | || |||| ||| || || ||||||| | ||||| || Sbjct 179445 TGTCCCCAATCTCGTTGAGCATCCAAGTTTCCCAGATACAGGCAGCTTTGCTTTCCCAAG 179504 Query 268342 GAGCT-TCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTA 268400 ||| | ||| || | | | || || || || || ||||| ||| || ||| Sbjct 179505 GAGATATCAGCCGC-----AGCCCTTGTAATCTTCCGTGTGACGAAAGTCCGCCCTCGTC 179559 Query 268401 GAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGT 268460 ||||||||||||||||| || || || ||||| |||||||| || || ||||| || | Sbjct 179560 TCGGGCTCTCGTGGTTGAACAGTATCCCATTGCATGCGAACATCCCGTACGCCTCCCGAT 179619 Query 268461 AGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGA 268520 | || || || |||| ||||| ||| ||| || | || ||| ||| |||| || Sbjct 179620 AATTGACCACTATCCAATATGCGTACAACTTGGCGCACCCATAGGGACTACGAGGATAGA 179679 Query 268521 AGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATG 268580 |||||||||| |||| || | || || ||||| | ||||| || || || | Sbjct 179680 AGGGCGTCGTCTCGCTTTGCGGCGTCTCCACTACCTTGCCGTACAGCTCTGATGTTGACG 179739 Query 268581 CTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGA 268639 | |||||||| | | || |||| | || ||||| | | | || || || | || Sbjct 179740 CCTGGTAGAACCGTACGTGATTTTGC-AGCCCGCAAGTCCTAACGGCATCTAGTAGCCGC 179798 Query 268640 AGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACA 268699 ||||| || | || ||||| || | || || || | ||||||||| ||||||| ||| Sbjct 179799 AGAGTCCCTAGCCCGTCCACATCGCCAGTGTATTCGGCCATCTCGAAGGACACCTTAACA 179858 Query 268700 TGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGC-ACGATCTTCAC 268758 ||| || || |||||||| || | ||| || | || | | || | ||| | ||| Sbjct 179859 TGGGATTGCGCTCCCAGGTTGTAGATTTCAGTAGGCTGGA-CGGAGGCTATGATGTACAC 179917 Query 268759 GAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCAAC 268795 ||| ||||| |||| ||| || ||||| |||||| Sbjct 179918 GAGATTCGTGCTATCGGAGAGATCGCCGTAATGCAAC 179954 >seq19 Length=654644 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || ||||| || | || ||||| ||||| || || || || ||||| || Sbjct 380993 CCGCCGCGCAGACGCAACACAAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCAGAA 380934 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | || |||||||| || Sbjct 380933 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGGG 380874 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||||| ||| ||||| || || | ||| || || Sbjct 380873 ATACCCTCCTTGTCTTGAATCTTCGCCTTCACGTTGTCGATCGTATCCGATGACTCGACC 380814 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| ||| || || || || ||||||||||| |||||||| Sbjct 380813 TCAGGGGTGACGGTCTTCCCGGTCAGCGTCTTGACGAAAATCTGCAT 380767 Score = 116 bits (128), Expect = 7e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||||||||| |||||||| || || ||||| || ||||| || || || ||| Sbjct 380765 CCGCCGCGAAGGCGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCCGAG 380706 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||| || | |||||||||||||| ||||| | |||||| ||||| || Sbjct 380705 AGGGTGCGCCCATCCTCCAGTTGCTTCCCGGCGAAGATGAGGCGTTGTTGATCGGGCGGG 380646 Query 68355 ATGC 68358 |||| Sbjct 380645 ATGC 380642 >seq3 Length=1836714 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||| ||||| ||||| || |||||||| ||||||||||| | || || || || Sbjct 1110635 CCTTCTTTGTCCTGAATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCA 1110694 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || || ||||| |||||||||||||| || ||||| Sbjct 1110695 AGGGTGATAGTCTTCCCCGTTAGGGTCTTGACGAAGATTTGCAT 1110738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620487633520